| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00514 |
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| Symbol | |
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| ID | 6777372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 544910 |
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| End bp | 545491 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642753946 |
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| Product | type IV pilus biogenesis protein PilN |
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| Protein accession | YP_002124826 |
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| Protein GI | 196155337 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATG TAAATTTATT GCCTTGGCGA GAAAAACAGC GCCAACATCA AAAACAACAA
TATTTAGCAG GCTTGTTGGC CGTGGCTGCC ATTGTGGGCT TAATTTTTTG GTTTATCGGT
CAAGCCATTG ACCAGCAAAT CAATAATCAA AACTCGCGCA ATCAATATCT TGAGCGTGAA
ATCGCTATAC TCGATGCGCA AATTGGCGAG ATTAAGACCG TAAAAGAAAA AAAGAGTGCA
ATAGAACAGC GTATGGCGCT AATTGAACAG CTTCAAGCTA GTCGAAATAT TGCCCCTATC
GTTTTTGATG AATTAGCTAA ACTCGTTCCA CCGGGCGTGG CTTTTGAAAC GATGACACGC
ACCAACAACC GTATTGAAAT AGAGGGAGTA AGCGATTCTA ATAACCGCTT ATCTGACTTC
ATGCGTGCGT TAGAAAATTC TAAAGTATTC GTTGCCGCAG AGCTCTCTAC CATTAAATCT
GACAGTAGCA CTGCAAGAGC CATTAGCAAC TTTACGCTCA CCTTTTCAAT AAATACGAAT
GTTGCTCCGC TAGAGGTTGA GAGTAGTAAG GCGCAGAAAT AA
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| Protein sequence | MAHVNLLPWR EKQRQHQKQQ YLAGLLAVAA IVGLIFWFIG QAIDQQINNQ NSRNQYLERE
IAILDAQIGE IKTVKEKKSA IEQRMALIEQ LQASRNIAPI VFDELAKLVP PGVAFETMTR
TNNRIEIEGV SDSNNRLSDF MRALENSKVF VAAELSTIKS DSSTARAISN FTLTFSINTN
VAPLEVESSK AQK
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