Gene MADE_00510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00510 
SymbolaroK 
ID6777425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp541214 
End bp541729 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID642753942 
Productshikimate kinase I 
Protein accessionYP_002124822 
Protein GI196155333 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000702686 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA AACGTAATAT CTTTTTAGTT GGCCCAATGG GTGCTGGCAA AAGTACCATC 
GGTAGACATC TGGCAGACGA ACTTCACCTA GACTTTTTTG ATTCTGATCA GGAAATTGAG
CGCCGTACAG GTGCTGATAT CGCTTGGATC TTTGATCTTG AAGGCGAAGA CGGTTTCCGA
GCGCGCGAAG AAAATGTCAT TAATGATTTG ACAGATAAGC AAGGTATCGT GCTTGCCACA
GGCGGCGGCT CTATAGTCAC TAAAGCTGTG CGTAATCGTT TATCTGCCCG TGGTATTGTT
GTTTACCTAC AAACAACAAT CGACAAGCAA GTTGCCCGTA CACAACGCGA CAAACGTCGC
CCTTTGCTGC AAAACGAAGA TCCAGAACAA GTACTTCGCG ATCTTGCAGA AATGCGCAAC
CCGCTTTACG AAGAAGTTGC TGATTACATT GTTGATACAG ACGACCAAAG TGCGCGTGCT
GTAGCAAATC AAATTATCAG TAAGATCGGT CTATAA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRHLADELHL DFFDSDQEIE RRTGADIAWI FDLEGEDGFR 
AREENVINDL TDKQGIVLAT GGGSIVTKAV RNRLSARGIV VYLQTTIDKQ VARTQRDKRR
PLLQNEDPEQ VLRDLAEMRN PLYEEVADYI VDTDDQSARA VANQIISKIG L