Gene MADE_00490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00490 
Symbol 
ID6777567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp517756 
End bp520884 
Gene Length3129 bp 
Protein Length1042 aa 
Translation table11 
GC content45% 
IMG OID642753922 
Productsensor protein BarA 
Protein accessionYP_002124802 
Protein GI196155313 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCT TTCGCGTATT CTTTTTTCTT TTCTTTTTTT TAGCTAGCGG CTTAGCCTCC 
ACTGCTTATG CTCAGCATAT CGAGCAACTT TTCGATGAAG AAAGTACGCT AGACTTGTCT
GATTCACTGT ATTTTTTATT TGAAACCGAC TACCAACTTA CCATTAGCGA TGTATCGAGG
CGCCGAAACG ACTTTTTGAT GCATCCCCAC GACAATCCTA ACTTTGGCTT TCGCAACAAC
GGTATGTGGT TGCTTACCTC TGTAGCCAAT GTATCAAATG AAGAAGATTG GGTATTTACA
ATTAACTTCA GTCAACTAGA TAGCGTTGAC TTTTATTTGG TTAAAAACGG TAAAGTCATA
AAACAAAGTC ACCAGGGAAA AGCGCAAAAA GAGCAGCGTT TTCGCGTCCC GACCTTTCGT
ATTGAACTGT CTGATAGCGA CGCCGTCGAC CTATACATCC GCATTGAAAG CCGCTCATCT
AGCTTAATCG CACCACTTCG CATTCAGGCA GAGCCTATTC ACAGCAGCTA TTTCCAAGCC
GACAGTATGC TGTGGGGCTT TTTTTATGGA GGGTTACTTA TCCTCGCCAT CTCCAATTTA
GCCCTCTTCT TTGGTGTTCG AGAGAAAAGC CTGATTGCTT ATGTGGGTTA TATTGGTGCG
GTGCTTTTAT GGCAGTTTGT GTGGGGCGGT CATATCCAGC TTGTATTTAG CCAAGGAATT
CCCTCTTGGC TAGTCGGTCA TTCCGAGCTT ATCTTTGTGA TTATTGGTAT CAGTTCTGGG
GTCTTTACCA TGACATTTTT GGAGACGAAT AGGCATTCCC CTACTGCGCA CCCCATTATT
AAATTGCTAT TGATTTGCCA AGGGCTAACC GGCCTTATTT GCTTCGTTGA CCTACTGCCT
TCAATTTGGA AAAACAATTT AGTGTATGGC GTTGGGCTTG TTGCCATTTT AAGCTATATC
TATGCGGGCT TTGAAGCCTT CTTTAATAAC TTCAAACCGG CCCGGTACTT CATCTTCGCA
TGGGGTATGC TTGCCACCGG CGCTATCGTG GGAATGCTAA GCCTTATCGG TGTACTCCCT
TCCAACGACT TTACCACTTA CTGTTTCCAA GTAGGGGTAT TCCTTGAAGC CGGCCTCTTC
TCGTTCGCCC TTATGGAAAA GAGCAGAAGC CAGCTTGAAA GCGAAGTCGA ACAGGCCACC
AACGATCTGC GCAACAATGT TGAGCTTATT GAAGAACAAA ATGCCCGCTT AGATATTGCG
CGAAAAGACG CGATCAAAGC CAGTAATGTT AAGTCTCAGT TCCTTGCCAA CATGAGCCAT
GAGATTCGCA CGCCCCTCAA TGCCATTTTA GGCTTCAGCA AAGAATTGAA TAATGCTTCA
CTGCCCACGG ATCAGCAAGA GCAAGTAAGA ATAGTAAATA CCGCCGCCGA TAACCTGCTC
ACTATCGTCA ATGACGTATT AGATTTTTCC AAGATTGAAG CGGGTAAGTT AACCATTAAT
AACCAGCCTT TCTCCCCTAA CAAACTGCTA GAAGAAATGG TCACCATTAT GGCGAAGTCT
TCTCACAGTA AACACCTTGA GTTTGTTTTT GATTTACATC CGCTGCCTGA AAAACTCATT
GGCGACGTGT TTCGCATCAA GCAGGTGCTG AACAATTTGC TAAGCAATGC CTTAAAATTC
ACATCAAGCG GTACCATAAC CTTTTCAGTG AGAGGCCGCG CACTACCCCA CGGTATCCAC
GAAGTGAATA TGACTATCGA AGATACGGGC ATAGGCATTA GCCGCCAAGA TAGAAAGAAG
CTGTTTAACG CGTTTTCGCA AGTTGATGAT GCCTTGAATC GCAACTACCA AGGTACGGGG
TTAGGGCTGG TTATTAGCAG GGAACTAGTG CGCTTAATGA ACGGCGACTT AACCCTTAAA
AGCGCACTTG GCCAAGGCTC AACGTTTATC GTTTCTCTTC GTATGACCCA GTTAAGTCAA
AAATACGCAC TAAGCAGCAA TGAAGACTGG CTAGGCAAAA AAGTGGTTAT CTTTGACCCC
GTGCCTGCAA CGCGTCGTGC AAGCGCTAAC ATGTTGTCTA TCTTGGGGGC GCAGGTAATC
TCGGTAGAAT CGCTAGATTA CTTGGCTACA CTTACTGGTC AATATGATTT CTTTATGGCC
GCCGTGCCCG TAAGCAAAAT GAGCTTGCGA GATGCATACC TTAGCCGTTT TGTTCAGTTC
CCCGCGCAAA AACGCATTCT TTGGTACTCG GGTCCAGAGC CATTCGCTCA ATACCCTAGC
CTCTCGCAAC ACTTCCATTC ACAAGTGCGC ATGCCAATGA CGTTAACTAA ACTCGATAGT
TTGGTTCATT GTAAAGTGAC ACCGGCTAAA AATGCGATGA TTGAGAAAAT TGAAAGCTTG
CCCAAAGTGA AGGTCTTAGC CGTTGACGAT ATGGAAATGA ACCTTAAGCT CCTACATACT
TGGCTTGACC ACTCCCCTAT TGAGCTGATT ACTACCATCA ATGGGCAAGA CGCAGTAAAT
CAGTGCCAAA TACAAGAATT TGACCTTATC TTAATGGACG TGCAAATGCC GGGTATGGAT
GGCGTGCAGG CCACCAGAGA AATTAGAAAA TCGCCATTAA ATATGGGCAC CCCTATTGTG
GCAGTAACCG CCCATGCGTT CAAAGAAGAG CAAGACCGAC TGCTGGCATC AGGAATGGAT
GACTACTTGC CTAAGCCCAT AGAAGTTGAC CTGCTGATCA CCTTAATTAA ATCGTGGTGC
CACAGTATTG AGCCGGGAGA GATTGTATTC CCTTCTATCG ACTGGCAGCT TGCCTTAAAG
CGTGCCAATC AGAATCAGGA TACGGCTAAA GAGATGCTTG ATAGCTTTAT TGCGCAGCTT
CCAGAGACGA TCGATACCCT TTCAGCACTA TGGAACGCAA AAGATTACAA CGCGCTTAAA
GCAGAGGTGC ATAAGCTTCA CGGCGCGTGT TGCTACACGG GTCTACCAAG AATGCAACAT
TTGGCCAATG AAACTGAGAG CGCGCTTAAA TTAGGACAAC ATGCCATGGT CGATGAACAT
TTACCAGCCC TACTCGAAGA AGCCAAAAAG GTGATAAGAG AAAGCATCAA CCATAATGGC
ACGTTCTAA
 
Protein sequence
MAIFRVFFFL FFFLASGLAS TAYAQHIEQL FDEESTLDLS DSLYFLFETD YQLTISDVSR 
RRNDFLMHPH DNPNFGFRNN GMWLLTSVAN VSNEEDWVFT INFSQLDSVD FYLVKNGKVI
KQSHQGKAQK EQRFRVPTFR IELSDSDAVD LYIRIESRSS SLIAPLRIQA EPIHSSYFQA
DSMLWGFFYG GLLILAISNL ALFFGVREKS LIAYVGYIGA VLLWQFVWGG HIQLVFSQGI
PSWLVGHSEL IFVIIGISSG VFTMTFLETN RHSPTAHPII KLLLICQGLT GLICFVDLLP
SIWKNNLVYG VGLVAILSYI YAGFEAFFNN FKPARYFIFA WGMLATGAIV GMLSLIGVLP
SNDFTTYCFQ VGVFLEAGLF SFALMEKSRS QLESEVEQAT NDLRNNVELI EEQNARLDIA
RKDAIKASNV KSQFLANMSH EIRTPLNAIL GFSKELNNAS LPTDQQEQVR IVNTAADNLL
TIVNDVLDFS KIEAGKLTIN NQPFSPNKLL EEMVTIMAKS SHSKHLEFVF DLHPLPEKLI
GDVFRIKQVL NNLLSNALKF TSSGTITFSV RGRALPHGIH EVNMTIEDTG IGISRQDRKK
LFNAFSQVDD ALNRNYQGTG LGLVISRELV RLMNGDLTLK SALGQGSTFI VSLRMTQLSQ
KYALSSNEDW LGKKVVIFDP VPATRRASAN MLSILGAQVI SVESLDYLAT LTGQYDFFMA
AVPVSKMSLR DAYLSRFVQF PAQKRILWYS GPEPFAQYPS LSQHFHSQVR MPMTLTKLDS
LVHCKVTPAK NAMIEKIESL PKVKVLAVDD MEMNLKLLHT WLDHSPIELI TTINGQDAVN
QCQIQEFDLI LMDVQMPGMD GVQATREIRK SPLNMGTPIV AVTAHAFKEE QDRLLASGMD
DYLPKPIEVD LLITLIKSWC HSIEPGEIVF PSIDWQLALK RANQNQDTAK EMLDSFIAQL
PETIDTLSAL WNAKDYNALK AEVHKLHGAC CYTGLPRMQH LANETESALK LGQHAMVDEH
LPALLEEAKK VIRESINHNG TF