Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00471 |
Symbol | |
ID | 6777679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 495379 |
End bp | 496644 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642753903 |
Product | membrane-bound lytic transglycolase-related protein |
Protein accession | YP_002124783 |
Protein GI | 196155294 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTAG CTTCACTTCA GTTTTCTTTT TTATCGACAT TTTCACTTAA AGGTGGCGTG TTTCGTACAT CACTTGCGCT TCTTTTTACA GGTGCTGTTA TAAGCTCAGC CTCTGCCAAT GAGCACTTTT CCAGCTGTAC TGCGGCCCTT GCCGACAGAG CAAAACAAGA AGGTGTCAGC CAGCAAATTA TCGACGAGAT ATTTCCTCAC CTTGTACATC AAGACCGCGT AATTGAGCTA GATAGAAGCC AGCCTGAGTT TGTACAAACC TTTCCCGGTT ATTTTAGCAA GCGCGTCACT GACTGGCGTA CCGAGAAAGG CAAAGCAATG TATGCCAAGC ACGAAAAGCT ATTGCATAAG CTAAGCGATA AATACGGCGT GCCTCCCCAC TATCTTCTTG CTTTTTGGGG GCTTGAGACT AATTTCGGCT CGTACAAAGG GAAGATGCCT GTACTTGATT CACTGGCAAC CTTAGCCTGT GACAAGCGCA GAAGTAAGTA CTTCACCCAA GAGTTCTTGG TTGCCGTAAA GCTTATGCAG CGGGAAAAGC TTAAAAAAGA CAACATGGTA GGCTCGTGGG CCGGCGCGAT GGGCCATACC CAATTCATGC CTTCGGCGTA TACTCATTAT GCAATTGATG GCGATGGTGA CGGACAAGTT AACCTGTGGG AAAGCGAAGA GGACGCTTTG TCTTCTGCGG CAAACTTCCT TGCCAGTTTA GGCTGGGAGC GCAGTTTTCG CTGGGGCCGT GAAGTTAAGC TACCAGAAGG CTTTAACTAT CAGGAGTCTG GCTACAAAAA CCGCAAACCT CTTAGCGAAT GGCACGAGCA AGGTGTGAAA AAAGCCGATG GTTCGCCATT AGGTGAAGGC GAAACGACTG CCTATGTGAT TGTACCGGCG GGTCACAATG GCCCGGCTTT TATCGCTTAC AAGAACTTCC GCGTTATTAT GCGTTGGAAC AACTCTGAGT TTTATGCCAT CGCCGTTGGC GTATTGGCTG ACCGTATTGC CGGCGCATCA GGTATTAAGG CTACGCTGCC TGACCTACCC GCCTATAACC GTAAAGACAT CATTGCCTTG CAAAGTAAAC TTAATGACTT AGGTTTCGAT GTGGGTAAGC CCGACGGCAT AATTGGCCCA GCCACCCGAG AAGGAATTCG AAACTATCAA ATTAGCAACA ACATGATTGC AGACGGCTTT CCTGGCCTTG AAGTTATGGC AGCGCTAAAT GTGGAGCTTG AGCGGGACAA AGCTTCACAG TCCTAA
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Protein sequence | MRLASLQFSF LSTFSLKGGV FRTSLALLFT GAVISSASAN EHFSSCTAAL ADRAKQEGVS QQIIDEIFPH LVHQDRVIEL DRSQPEFVQT FPGYFSKRVT DWRTEKGKAM YAKHEKLLHK LSDKYGVPPH YLLAFWGLET NFGSYKGKMP VLDSLATLAC DKRRSKYFTQ EFLVAVKLMQ REKLKKDNMV GSWAGAMGHT QFMPSAYTHY AIDGDGDGQV NLWESEEDAL SSAANFLASL GWERSFRWGR EVKLPEGFNY QESGYKNRKP LSEWHEQGVK KADGSPLGEG ETTAYVIVPA GHNGPAFIAY KNFRVIMRWN NSEFYAIAVG VLADRIAGAS GIKATLPDLP AYNRKDIIAL QSKLNDLGFD VGKPDGIIGP ATREGIRNYQ ISNNMIADGF PGLEVMAALN VELERDKASQ S
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