Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00375 |
Symbol | |
ID | 6775707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 395707 |
End bp | 396585 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642753804 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_002124687 |
Protein GI | 196155198 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCATA ATCATTCAAA TAGCTCAAAC AAAATTGGGT GGGCTTTTCT ATTAAATTTC AGCTTCACAA TTATTGAATT TATTGGCGGC TGGCTAACGA ACAGCACTGC TATAATGGCA GATGCTGTTC ATGATCTCGG CGATTCAGTT TCTATTGGAA GCGCCTGGTG TCTCAATAGG TTAGGAGAGA GAGAGGCCGA TGAAAATTTC ACATATGGGT ACAAGCGACT CAGCCTGTTA GGGGCATTTA TTAACGGAGC CGTACTTATC CTTGGCTCAA TCTGGGTATT ATCAGAAGCC ATTCCTCGAG TATTAGACCC GGTCGTTCCA AATACAGAAG GCATGATATT ACTTGCGATT CTAGGTGTCG CTGTAAACGG CTTTGCTGTG TATAAACTCC AGGGAGGAAA TACCCTAAAC GAGAGAGTGT TGAACTGGCA TTTATTGGAG GACGTTTTAG GCTGGGTTGC TGTATTAATT ATTGCCATAG TAATGCAATT TGTCGACTGG CCAATTTTAG ACCCCCTACT TTCGATTGGC TTTACGCTTT TTATATTGTT TAATGTAATT CGAAACTTAT TAGCAACCTT AAAATTATTT TTGCAAGGTG TTCCAGAGAA AAACTTATAC AAACAAGTGT TAGATGAACT CCGGAGTGTT GATAGAGTTG AATATATCCA TGACTTAAAA ATTTGGTCAC TTGACGGAGA ACACAATGTT ATTACTATAC GCGTTGGCAG TGCCTTAAAG ACAGTTGAAG AATACAAGTT ATTGAAGCTT GATATTTATG ATAGCTTGGC CATGTTTGAC TTCAGTTACA GCACAGTTGA AATAGAGTTT ACTGACGAGC ATTCTGCAGT TAATGAGGAG GTGAGATGA
|
Protein sequence | MTHNHSNSSN KIGWAFLLNF SFTIIEFIGG WLTNSTAIMA DAVHDLGDSV SIGSAWCLNR LGEREADENF TYGYKRLSLL GAFINGAVLI LGSIWVLSEA IPRVLDPVVP NTEGMILLAI LGVAVNGFAV YKLQGGNTLN ERVLNWHLLE DVLGWVAVLI IAIVMQFVDW PILDPLLSIG FTLFILFNVI RNLLATLKLF LQGVPEKNLY KQVLDELRSV DRVEYIHDLK IWSLDGEHNV ITIRVGSALK TVEEYKLLKL DIYDSLAMFD FSYSTVEIEF TDEHSAVNEE VR
|
| |