Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00290 |
Symbol | |
ID | 6779192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 315905 |
End bp | 316654 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642753719 |
Product | hypothetical protein |
Protein accession | YP_002124602 |
Protein GI | 196155113 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACT TGGATGTTCA TAAAAAAGTA GCGGTACTAA TTGATGCTGA TAACGCTCAG CTGTCGAAAC TTTCTGCCAT TTTGGATGAG ATATCAGCAC ACGGCCATGT TCTCATCAAG CGTGCCTACG GGGACTGGTC TATTGATGCG TTGAAGAACT GGAAGACGCC TCTTAATGAA TTAGCCATAC AGCCGATTCA GCAATTTGCT TATACAACGG GTAAAAACGC AACAGATGCG TCGATGATTA TTGATGCGAT GGATTTACTC TATTCTGAAA AAATAGACGC ATTTGCTTTA GTATCCAGTG ATAGCGACTT TACTAAGCTA GCGTCACGTT TGAGAGAATC AGAGAAGTTT GTGTTTGGCG TAGGTGAGAA AAAAACGCCA GTGTCATTTC GCAACGCCTG TGATGACTTT ATATTCACCG AAAACCTAGA GGCTGGTCAG GTTTCTAAAT CAGGTAAACC TAAACAGGAG CAAAGTAGCG CTGGTAATGG TGCAGAAGAG CTAATACCAG CAATGCTTAA AGCTTGGGAG TTATATCAGA ATGATGATGG TTGGGTGAAT GTTAGTCCAG TTGGTAATTT TCTAAAACGT GCAAAACCTG ATTTTGACCC AAGAACTTAT GGTGCAGCAA AAGTGACCGA TATTGTTTCC AGTCTGCCTA CCGTCTTTGA AATGACGAGA CAGAAAGGAA AAGGGACGAC ACAAATTATC TTGTACCGTC CTATCTTCGC GACCACTTAG
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Protein sequence | MKDLDVHKKV AVLIDADNAQ LSKLSAILDE ISAHGHVLIK RAYGDWSIDA LKNWKTPLNE LAIQPIQQFA YTTGKNATDA SMIIDAMDLL YSEKIDAFAL VSSDSDFTKL ASRLRESEKF VFGVGEKKTP VSFRNACDDF IFTENLEAGQ VSKSGKPKQE QSSAGNGAEE LIPAMLKAWE LYQNDDGWVN VSPVGNFLKR AKPDFDPRTY GAAKVTDIVS SLPTVFEMTR QKGKGTTQII LYRPIFATT
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