Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00225 |
Symbol | |
ID | 6775638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 239379 |
End bp | 240707 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642753653 |
Product | transporter, putative |
Protein accession | YP_002124537 |
Protein GI | 196155048 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAATTAC GCGCCGCGCT TGCACTTGCC TCCGTTTACG TTTTACGCAT GATGGGGTTG TTCATGGTTA TGCCAGTTTT GGCGGTTGCT GCTATGGACT ACCCTGACTA TTCTCCGCTA TTGGTGGGGC TTGCCGTGGG GGGATATGGT CTAACGCAGG CCGCGCTTCA AATTCCCATG GGCATGATGT CTGATAAATG GGGGCGCAAA CCTGTCATTT TGTTAGGGCT TGCCGTATTT GCATTGGGAA GCTTTGTGGC CGCGAATGCC GACAGTATGG TCATGATGAT TGTAGGGCGT ATTCTTCAAG GTGCGGGAGC CATTGCAGGT GCAATAATGG CACTTGCTAC CGACGTAAGC CGCGAAAGTC AGCGGGCTAA AGTATTAGCC ATCATAGGAA TCGCCATTGG CTTTTCGTTC TATTTGGCCG TTATTTTAGG GCCACTTATT GCCAACAGCT ATGGCCTTAC AGGCGTTTTC GGCATTACTG GCATCTTGGC CATTCTATGC ATGCCGCTGG TTAAATGGGT TGTCCCAAAC GGTGTACAGC TGAGCAGTGG CGATACACTT CCTCAAAAAG ATCAGCTAAA ACGTTTAGTA TTTTCATCTC AGTTATGGCG TTTAAATATC AGCGTGATGA TTTTACACAT GATGATAACG CTGCTTTTCG TGCAGCTTCC GGTCACGCTG CTAAATTTCG ATATGGCGTT AGACAGCCAT TGGACCGTTT ATTTACCTGT ACTAGGCGCA TCCATTGTTG GCCTTATTAT AATGATGGGG ATGGCAAGGG GGCGAACGCC TAAATCGCTG CTTGTCACAG GTGTAGTGTT AATGGGTGGC GCATTTTTAG CGCTTAGCTT GGAAGACCAC AGCTGGTGGT GGGTGACGGC AGCGGTCGTG CTGTTCTTTA CTGGCTTTAA TTACTTAGAA GCGAATTTTC CTGCGTTGGT GTCGAGCATT GCGCCGGCTG GGCAAAAAGG AACGGCCATG GGGCTTTACG CCAGTTTCCA GTTTTTTGGT GCATTTTTGG GAGGCGTAAT ATCTGGTTTG GTTACTGATA TTTGGTCTCA AGACATCGCC TACGGTATTG GCGCTGCCAG CACATTGCTT TGGCTCTTCA TCATTTTTGG GGTGAAGGAA GCGAGCCGTG TTAAGCGTGT GATGATGAAC GGTGAGTTTG ATAATTCCAA TATCTCCAGC ATCGAAGCAG AACTAATGCG AGTACCAGGT GTACTAGAAG TGACATTAAA CAGTCAAAAT AACGCGGTAT ACCTTAAGGT TGACCGCGAC TTTGACGCGG TCAAAGCGCG AGATGTGTTG TCAGCGTAA
|
Protein sequence | MELRAALALA SVYVLRMMGL FMVMPVLAVA AMDYPDYSPL LVGLAVGGYG LTQAALQIPM GMMSDKWGRK PVILLGLAVF ALGSFVAANA DSMVMMIVGR ILQGAGAIAG AIMALATDVS RESQRAKVLA IIGIAIGFSF YLAVILGPLI ANSYGLTGVF GITGILAILC MPLVKWVVPN GVQLSSGDTL PQKDQLKRLV FSSQLWRLNI SVMILHMMIT LLFVQLPVTL LNFDMALDSH WTVYLPVLGA SIVGLIIMMG MARGRTPKSL LVTGVVLMGG AFLALSLEDH SWWWVTAAVV LFFTGFNYLE ANFPALVSSI APAGQKGTAM GLYASFQFFG AFLGGVISGL VTDIWSQDIA YGIGAASTLL WLFIIFGVKE ASRVKRVMMN GEFDNSNISS IEAELMRVPG VLEVTLNSQN NAVYLKVDRD FDAVKARDVL SA
|
| |