| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00206 |
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| Symbol | |
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| ID | 6776243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 223114 |
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| End bp | 224364 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753634 |
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| Product | putative diaminopimelate decarboxylase |
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| Protein accession | YP_002124518 |
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| Protein GI | 196155029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTATT TCGCCTACAG CCAAGGTCAG CTTCACGCTG AAGAGGTCGC TGTTTCTGAT
ATTGCAGCTC AGCACGGAAC GCCGGTTTAT ATTTATTCAA GAGCCACGTT AGAACGTCAT
TGGCACGCTT TTAACGATGC CATTGGTGAG CACCCTCACC TGGTTTGTTA TGCCGTTAAA
GCTAATTCTA ATATTGGCGT ATTAAGTGTA TTAGCGAAGC TGGGTTCAGG TTTTGATATT
GTTTCAGCCG GTGAACTCGC CCGCGTTATA GAAGCCGGTG GCGACGCTAG CAAAGTGGTT
TTTTCTGGCG TAGGCAAAAA GCACGACGAA ATTCGCTATG CGTTAGAGCA AGGCATTATG
TGCTTTAACG TAGAGTCAGA GCCTGAATTA CACCGCATTA ATGAAGTGGC CGGTGAAGTA
GGCGTAAAAG CCCCTATTTC TTTGCGTATT AACCCAGATG TAGATGCTAA GACACACCCT
TACATCTCAA CTGGCTTAAA GGCCAATAAA TTTGGAATAG CGCGCGAGCG CGCACTGGCG
ACTTATGAAC TAGCGGCATC GCTTCCAAAT TTGAATGTAG TGGGAATGGA TTGCCACATT
GGCTCTCAGT TAACTGAAAT AGGTCCCTTC GTAGATGCGT TAGAGCGTTT GCTTGTGCTT
ATTGATGAGC TTGCTGAGCG CAACATCATC ATCGAACATT TAGATGTGGG CGGCGGCCTG
GGCGTGACTT ATAACGATGA AGAGCCACCC CACCCTAAAG CCTATGCACA AGCCATGGCT
GAAAAAATGG TCGGCAGAGA GAACCTCAAA CTTATCCTTG AGCCGGGCCG CGCTATTGCC
GCCAACGCTG GTATTTTAGT CACCGAGGTC GAGTTCATCA AAGAAGGCGA AGAGAAAAGC
TTTGCTATTG TCGATGCGGC AATGAACGAT CTGCTGCGTC CAGCGCTTTA CTCAGCGTGG
CAAAAGATTA TCCCGGTAAA AGAAGAAAGC ACCGCAAAAC TACACACCTA CGATGTGGTA
GGCCCAGTGT GCGAAACCGG TGACTTTATA GGCAAAGACC GTGAATTAGC CATTGAGCCC
ACCGATTTAC TTGCAGTTCG CAGTGCCGGT GCCTATGGTT TTGTTATGGC GTCGAACTAC
AACAGCCGCT GCCGCCCAGC GGAGATTATG GTAGATGGTG ACAAAGCCAT TGTGGTTCGC
GAAAGAGAAA AACAAAAAGA TCTCTGGCAA GGTGAGCATA AACTTCCGTA A
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| Protein sequence | MDYFAYSQGQ LHAEEVAVSD IAAQHGTPVY IYSRATLERH WHAFNDAIGE HPHLVCYAVK
ANSNIGVLSV LAKLGSGFDI VSAGELARVI EAGGDASKVV FSGVGKKHDE IRYALEQGIM
CFNVESEPEL HRINEVAGEV GVKAPISLRI NPDVDAKTHP YISTGLKANK FGIARERALA
TYELAASLPN LNVVGMDCHI GSQLTEIGPF VDALERLLVL IDELAERNII IEHLDVGGGL
GVTYNDEEPP HPKAYAQAMA EKMVGRENLK LILEPGRAIA ANAGILVTEV EFIKEGEEKS
FAIVDAAMND LLRPALYSAW QKIIPVKEES TAKLHTYDVV GPVCETGDFI GKDRELAIEP
TDLLAVRSAG AYGFVMASNY NSRCRPAEIM VDGDKAIVVR EREKQKDLWQ GEHKLP
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