Gene MADE_00192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00192 
Symbol 
ID6776400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp205552 
End bp206166 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID642753620 
ProductGTP cyclohydrolase II 
Protein accessionYP_002124504 
Protein GI196155015 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA AACAGCCTAA ATACGAATAT GTCAGTACCG CAAAATTACC CACACGTATG 
GGTGATTTTA AAATACACGG TTTTGTAGAA GCCAGCGGCC AAGAGCACGT TGCCCTTTCC 
TATGGAGAGT GGAAAGAAGA TGACGTGGTA CCAATTCGTA TTCATTCAGA GTGCTTAACC 
GGTGACTCTT TGTTTAGTAC CCGTTGCGAC TGTGGCTTCC AGCTAGAAAA AGCCATGCAA 
AATATCGTTG ATAACGGTCA TGGTGTACTG CTTTACTTGC GACAAGAAGG GCGCGGAATA 
GGCCTTTTAA ATAAAATTCG TGCTTATAAC CTTCAAGATA GCGGCATGGA TACGGTTGAA 
GCTAACGAAC ATCTCGGCTT TGACGCCGAT TTAAGAAGCT ATGATATTTG TAAGCTTATG 
TTGGATACGC TAAACGTAAA ACACGTTGAG CTGATGACGA ACAACCCTAA AAAGTTGGCG 
GCGCTTAAAG CATTAGGTAT TGACGTGGTG GCGAGAAAGC CTATTGATCA CGGCATTACC 
AAAGACAATA AAAATTATTT AAAAACAAAG ACGGAGAAGC TAGGTCACGC CTTTGACCCC 
CACGTTTTCA AATAA
 
Protein sequence
MSSKQPKYEY VSTAKLPTRM GDFKIHGFVE ASGQEHVALS YGEWKEDDVV PIRIHSECLT 
GDSLFSTRCD CGFQLEKAMQ NIVDNGHGVL LYLRQEGRGI GLLNKIRAYN LQDSGMDTVE 
ANEHLGFDAD LRSYDICKLM LDTLNVKHVE LMTNNPKKLA ALKALGIDVV ARKPIDHGIT 
KDNKNYLKTK TEKLGHAFDP HVFK