Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00145 |
Symbol | |
ID | 6775273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 153694 |
End bp | 155274 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753573 |
Product | Thiamine monophosphate synthase |
Protein accession | YP_002124457 |
Protein GI | 196154968 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAGA ACGCCTTGCA GCAGCCTGCG GTTAAACAGC CGGTTGTATG GTGTATAGGC GGTATAGATT CTAGTGGCGG CGCGGGTATT ACCCGCGATG CCATTACCCT TGCCGACTTA AACGTTCACG CCTGCGTCAT TACTACGCAG GCCACTGTGC AGTCGAATTC GATAATGCTA AGCAAAGAAA GTATGACGGC TTCAGCACTG AATCAACAGT GGCAGGTACT TAGCGAGAGC ACACCAGCCA GCGCGATAAA AATTGGCGCT ATTGCTAACG ATGAACAAGC GCTGTTGTTG TGCGCGCGCA TTCGCTCAAT GGATAAACCT CGGCCATTTG TATTGTGGGA CCCGGTAATA CGCACATCAT CAGGTGGAAA ATTAAGCGAA CTGTCTGAAC CTGTAGTAGA AGAACTTTTA AATACCGTAG ATTTAGTCAC GCCTAATACC CAAGAGCTTT CGTGGTTAAC TCGTCTATCG ATAAAAAGCG AAGATAGCTT GCTTACTGCA GCCCACCAAC TCATAACCAA GGGCGCGCAC GCGATTTACA TAAAAGGGGG ACACGCCAAC TGGCAAGCAC ACGTATGCGA TACCTTCATC AGCCCCACCC AAACCATACA GTTTAGTCAG CCAAGAAAAG AGACCAGCAA GCTTCGCGGT ACGGGCTGTA TGTTAGCCAG TGCCATAGCG GCTTTTGTGG TAAACGACTA CTGCATTGAA GATGCCCTTA CCCTTGCCAA CGCTTATGTT AGCCAGGTTA GGCATGCTTC TTGTGCGAAC ACAGCGTATA CTCTTACATC ACAAACAAGC AGCCCTGCCT TTGGGCACTG TATAGGTTTC CCCAATAACC CATTGTGCTT TCCTTCGGTA AAATTTTATC AACGGGAACA CGCGCCCTCG CAGCCGTCAT TGCTAAGCGC CAAACAGGTG TCACACGTTC AAAGCCAAGC TATAGAACGC CCCTTTCCCG CCCTTACGCA AACCGACTTG GGCTTATACC CTGTTGTTGA TAGCGTTGAC TGGATAGCAC GCTTATTACC TACCGGGGTT AACATCATTC AGCTTCGCGT AAAGCACGGA ACGCAGGAAG AGATTCGCCA ACAGATAAAA GAAGCCATAG CACTTACGAA AAACACACAC TGCCAACTGT TCATTAACGA CTACTGGGAG TTAGCTATTG CGCTAGGTGC GTACGGCGTT CACTTAGGGC AAGAAGATAT CGACACCGCA AATTTAGAGG CCATTCGACA GGCAGGTTTA CGGCTTGGTA TTTCTACCCA CGGCTTTGCT GAAATACAGC GCGTACGTGC TTTGCACCCT TCGTACATAG CCCTAGGGCA CATATTTCCT ACGAATACCA AAGACATGCC ATCTAAGCCT CAAGGGGTTG AGAGGCTGCG TAAATACGTA GCCCTATGCG AAGGAATTCC TACGGTCGCG ATAGGCGGTA TCAATTTAGC GCGCATTGCC GATGTAGCAA AAACCGGGGT TAATAGTATT GCCGTCGTCA GTGCAATTAC CCAAGCTGAT GAACCGTTAA ATGCGTTTTG CAAACTATCG AAGGAGGCGG GTTTTGCATA G
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Protein sequence | MTENALQQPA VKQPVVWCIG GIDSSGGAGI TRDAITLADL NVHACVITTQ ATVQSNSIML SKESMTASAL NQQWQVLSES TPASAIKIGA IANDEQALLL CARIRSMDKP RPFVLWDPVI RTSSGGKLSE LSEPVVEELL NTVDLVTPNT QELSWLTRLS IKSEDSLLTA AHQLITKGAH AIYIKGGHAN WQAHVCDTFI SPTQTIQFSQ PRKETSKLRG TGCMLASAIA AFVVNDYCIE DALTLANAYV SQVRHASCAN TAYTLTSQTS SPAFGHCIGF PNNPLCFPSV KFYQREHAPS QPSLLSAKQV SHVQSQAIER PFPALTQTDL GLYPVVDSVD WIARLLPTGV NIIQLRVKHG TQEEIRQQIK EAIALTKNTH CQLFINDYWE LAIALGAYGV HLGQEDIDTA NLEAIRQAGL RLGISTHGFA EIQRVRALHP SYIALGHIFP TNTKDMPSKP QGVERLRKYV ALCEGIPTVA IGGINLARIA DVAKTGVNSI AVVSAITQAD EPLNAFCKLS KEAGFA
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