| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00129 |
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| Symbol | |
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| ID | 6779200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 135024 |
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| End bp | 136076 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753559 |
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| Product | probable membrane fusion protein (HlyD family of secretion proteins) linked to ABC efflux pumps |
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| Protein accession | YP_002124443 |
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| Protein GI | 196154954 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000116655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CGCCGTTTAT TCTATCCATT ATGTTCGTTG TGTTTTTAAT TGTGGTTTTT
AGTACTGTTT TCAGTGGCCC TGAAAATGTC GATGTGGTGT CAGGGAATGG CCGCATTGAA
GCTACTGAAA TTGGCATTTC TGCAAAAGTA GCAGGGCGTG TAGAAGAAAT TTATGTCAGC
GAAGGAGACA GAGTAACGGC GGGCGATGTG GTCGCCAAAC TTGATACCAC CACCATTAAT
AGCCAGCTTC AGCAGGCCAA GGCACAGCAC CAGCAAGCCA AAAGTGCGGT AGAAGCTGCA
AATATGGCTG TTGCACAGCG CCAAAGTGAA AAGTCAGCGC TTGAAGCCGC GCTGCTGCAA
ACTAAAGCCG AGCTAAAAGC AGCTGAAGCT CATGCTGCCC GTACTAATGA ATTGGCAAAA
ACAGGCGCTG TGTCTAAACA ATTGGCAGAA GATAACCTTA CCAATGTTGA AAGCGCAAAG
GCGGCGGTAA ATGCAGCTAA GGCTCGTTTG ACAGCGGCTG ACGCCACCAT TGAAGCTTCG
CGCGCGCAAT ACTACTCGGC ACAAGCAGCG GTCAGCGCTG CCAATGCCAC TATTGCGCAA
ATCCAATCTG AAATTAACGA TATGGTGTTA AAAGCACCAC GTAATGGGCG TATTCAATAC
CGCGTAGTGG AGCCTGGCGA AGTTGTTAGT GCAGGTGGGC GTGTACTTAG TTTGGTCGAC
CTAACAAACG TATACATGAC ATTCTTTTTG CCTGCTTCGC AGGTGGGCAA GCTTACTATG
GGCGGTGAAG CACTTATTGT GCTAGATGCC GCGCCCGACA TCGCTATTCC GGCCACCATT
TCTTACGTTG CCGACGTAGC GCAATTTACT CCTAAGTCGG TTGAAACCCA AAGTGAGCGA
GAAAAACTTA TGTTTAGGGT TAAAGCGCAA ATTCCTGAAA ACTTATTAAA GCAGCACATT
GAAAAAGTGA AAACAGGGTT GCCGGGTGAA GTATGGGTAA AGCTAAACGA TACCGCTGAA
TGGCCTAGCG ACCTACCTGA GCTTGTCGAC TAA
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| Protein sequence | MKKTPFILSI MFVVFLIVVF STVFSGPENV DVVSGNGRIE ATEIGISAKV AGRVEEIYVS
EGDRVTAGDV VAKLDTTTIN SQLQQAKAQH QQAKSAVEAA NMAVAQRQSE KSALEAALLQ
TKAELKAAEA HAARTNELAK TGAVSKQLAE DNLTNVESAK AAVNAAKARL TAADATIEAS
RAQYYSAQAA VSAANATIAQ IQSEINDMVL KAPRNGRIQY RVVEPGEVVS AGGRVLSLVD
LTNVYMTFFL PASQVGKLTM GGEALIVLDA APDIAIPATI SYVADVAQFT PKSVETQSER
EKLMFRVKAQ IPENLLKQHI EKVKTGLPGE VWVKLNDTAE WPSDLPELVD
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