| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00115 |
|---|
| Symbol | |
|---|
| ID | 6775719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 115288 |
|---|
| End bp | 116145 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642753545 |
|---|
| Product | putative orphan protein |
|---|
| Protein accession | YP_002124429 |
|---|
| Protein GI | 196154940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.281314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAA GAAGTGATGT TGAATGGCCG CTATGGCGTA AAAAAGTAGA TGGTACCTTT
CTCAAAGAGT TCTCTACACC AATACCCCAA TGGGTTCAAA AAATATGGCA GATTCAGGAT
AACTTTAGTG AAGTTAGGTC TAAACTAGAT GAAATGAGCA ATGTACGCAT TCAGTTTAAA
AAACAGATTT TCGAAGGAAA TGTAGTAAAA AGAAAAAGCC AGAACGGCTA TCGATATAGG
CTTAGTTTTC AGCGTGAATT AGGCCGGAAG TTACAGGATA TCTATTTAAT GACCTTTATG
AGAGCTATTG AAGCCGAGCT CACAGAAGGA GTTAGCCATA GACAAATTGA AAAGGACATA
AGTTTCTGGG AGTTTCTTGA TATTGAATTC GATATTGATA ATAAGCTTTT TATATTTACA
CCAAGCTTCA CAGTAGAGCC CCAGTTCCCT CAATTATTTA ATCGGTTAAT CGATTCAGCA
CCGCTTAAGG CAGTGGCTTC TACCCTATTG TCTGGTGAGT TCGCGCGTAT TCACAAGCAA
GACTGGAAGC CACGATCAGA ATACAAACTA GAAATTGGTG CAAGCAATGT TATTTATATG
CTGTTGGATA CTGAGAACAA ACTTCTTTAT GTTGGGGAAG CGAACTTACT AATTCCTAGG
TTTAATAATG GCCATCTTGA TATAAAAAAT TGGGATTATT ATAAGTACAA CGTTCTCCCG
CCAGAACTTG GAAAATACAG ACTAGCTATA GAACGAATGC TAATCAGAGA TCTCGCTGCG
ATTTTAGATA ATAAACAGGG AATTAAAACA ATTTCAATCT CTGACTATAG CCTTGCTAAT
CGTAAAATAG ATATTTAA
|
|---|
| Protein sequence | MLERSDVEWP LWRKKVDGTF LKEFSTPIPQ WVQKIWQIQD NFSEVRSKLD EMSNVRIQFK
KQIFEGNVVK RKSQNGYRYR LSFQRELGRK LQDIYLMTFM RAIEAELTEG VSHRQIEKDI
SFWEFLDIEF DIDNKLFIFT PSFTVEPQFP QLFNRLIDSA PLKAVASTLL SGEFARIHKQ
DWKPRSEYKL EIGASNVIYM LLDTENKLLY VGEANLLIPR FNNGHLDIKN WDYYKYNVLP
PELGKYRLAI ERMLIRDLAA ILDNKQGIKT ISISDYSLAN RKIDI
|
|---|
| |