Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00069 |
Symbol | |
ID | 6778964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 72834 |
End bp | 73697 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753498 |
Product | putative glpG protein |
Protein accession | YP_002124383 |
Protein GI | 196154894 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCATC CTTTAATTGC GTTTAATCAA CAAAGTCCAG CGCACCTTCT CGCTAACTAC TTAACCAGTC AGAACATTAC GGCCAACGTT GTTCAAAGCG ATAAAGAATT CGTGGTAGTA CTTAACGAAG ATGCGCATAT CGACCGCGCA AAAATCATAG CGGAAGACTT CTTAGCGAAT CCTACTCACC CTAAGTATCA GCAGGCTGCG TGGGACAGCG GTAAGAATGT GCAGCTTGCG CCCTCAGGCA GCGGCTTTTC TATGGGCAAT ATTATTACCG ATGCGGTCAA AGCGCCTTTC ACGTCAGTGG TGTTTATACT GTGCGTAGCG GTGTATGGCT TGTCGTTACT TGGCATGTTC GCGCCTATTG CCCAGCATTT ACTTATGCAG CCGTTTTCTG TTTTGGCACA AAATCAAGAA TGGTGGCGTT TACTCGGTCC GGCGTTCATA CACTTTTCGG CATTACACAT CATATTTAAC CTGCTTTGGT GGGCCATGCT AGGGGCCAAA ATTGAACGGA CCCTTGGCAT GAGCATGTTG CTCATTGTGT TTATCGTATC GGCAACTATA TCCAATGCGG CTCAGGCTAT TTTTAGCGAA CCGGTGCAGG GTAACTTGTA TCTATTTGGC GGCTTGTCAG GCGTGGTTTA CGCTGTAATG GGGTTTGTGT GGTGGTTAGG GTGGCTACGC CCAAGCTGGG GCTTGTCGCT ACCTAACTCT ATTGTGGGGT TTATGCTGGT GTGGCTGGTG CTCGGTTATG CCGATATCTT ATGGGTAAAC ATGGCGAACG CGGCGCATAC CGCAGGACTG ATTTCGGGTT GCCTATTGGC GGCAACATTA AGCCTTGGCT CGGGCAAGCG TTAA
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Protein sequence | MGHPLIAFNQ QSPAHLLANY LTSQNITANV VQSDKEFVVV LNEDAHIDRA KIIAEDFLAN PTHPKYQQAA WDSGKNVQLA PSGSGFSMGN IITDAVKAPF TSVVFILCVA VYGLSLLGMF APIAQHLLMQ PFSVLAQNQE WWRLLGPAFI HFSALHIIFN LLWWAMLGAK IERTLGMSML LIVFIVSATI SNAAQAIFSE PVQGNLYLFG GLSGVVYAVM GFVWWLGWLR PSWGLSLPNS IVGFMLVWLV LGYADILWVN MANAAHTAGL ISGCLLAATL SLGSGKR
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