Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00067 |
Symbol | tdh |
ID | 6779014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 71325 |
End bp | 72350 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753496 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_002124381 |
Protein GI | 196154892 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCGC TAGTAAAAGC GAAGGCGGAA AAAGGCATTT GGCTGCAAGA CACGCCAAAG CCGGAAGTCG GGCACAACGA CCTGCTGATT AAGATTCGCA AAACCGCTAT TTGCGGTACC GATATGCATA TCTACAACTG GGATGAATGG TCACAAAACA CCATTCCCGT GCCTGTGGTC GTCGGTCACG AATACGTAGG CGAAGTAGTG GGTATGGGGC AAGAAGTAAA AGGCTTCGAA GTAGGTGACC GTGTGTCCGG TGAAGGTCAT ATTACCTGTG GTCATTGCCG AAACTGCCGT GCTGGCCGCG TACATTTGTG CCGCAACACC GAAGGTGTGG GTGTAAACCG CCCGGGGGCC TTTGCCGAAT ATTTAGTTAT TCCTGCCTTC AACGCGTTTA AAATTCCAGA CAATATCAGC GACGACCTAG CGTCCATATT TGACCCATTT GGTAATGCTG TTCATACCGC GCTAAGTTTC GACTTAGTAG GCGAAGACGT ACTTATCACA GGTGCAGGAC CTATCGGCAT TATGGCGGCT GCGGTCGCCA AGCACGTTGG TGCGCGTCAT GTTGTGGTTA CCGATATCAA CCCTTATCGC CTTGAGCTTG CTAAAAAAAT GGGTGCTACT CGCACTGTTG ATGTCAGTAA AGAAAACCTA CAAGACGTTA TGGATGAGCT GGGCATGTCA GAAGGCTTTG ATGTAGGCCT AGAAATGTCG GGCGTGCCGG TAGCCTTCAG AGACATGCTG AACAAAATGA ACCACGGCGG CAAAATAGCC ATGCTAGGTA TACCGCCACA GGATGTGGCA GTCGACTGGA ACCAAGTTAT TTTCAAGGGC TTGGTAATAA AAGGTATTTA CGGCCGTGAA ATGTTTGAAA CCTGGTACAA AATGGCGAGT TTGCTGCAAA GCGGTTTAGA CCTGTCGCCT ATCATCACAC ATACCTTTTC TATTGATGAC TTTCAGAAAG GGTTTGATAC CATGGGGTCA GGACACTCAG GTAAAGTTAT TCTGGACTGG CAATAA
|
Protein sequence | MKSLVKAKAE KGIWLQDTPK PEVGHNDLLI KIRKTAICGT DMHIYNWDEW SQNTIPVPVV VGHEYVGEVV GMGQEVKGFE VGDRVSGEGH ITCGHCRNCR AGRVHLCRNT EGVGVNRPGA FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA AVAKHVGARH VVVTDINPYR LELAKKMGAT RTVDVSKENL QDVMDELGMS EGFDVGLEMS GVPVAFRDML NKMNHGGKIA MLGIPPQDVA VDWNQVIFKG LVIKGIYGRE MFETWYKMAS LLQSGLDLSP IITHTFSIDD FQKGFDTMGS GHSGKVILDW Q
|
| |