Gene MADE_00043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00043 
Symbol 
ID6778996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp49048 
End bp50799 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content44% 
IMG OID642753472 
Producthypothetical protein 
Protein accessionYP_002124357 
Protein GI196154868 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCT ATCTATTAGC AGCATTACTA CTAATTTGCA GTGCTAGTTC ACCGGCAAAA 
GTCCTTAATG ATGAAAGCTT GTATCAACTG CTTGATGACA TTTGGCAATA CGAGCTTTCC
GTTTCTCCCC TATTGGCTTC CCGTCAAGGC GATAACACAC TAGCACATGC TTTACCTGAT
ATTTCACCTG AAGCATTAAA AGCCAAAAAC GAACAATGGC GTGCATTTCA AAAAGCACTA
AGTCAGTACA AAAAAGAAGA CATTTCTACC GACGGGTATA TTGCACTACT GATGCAACAA
TACCGGTTGG CTAACTATGT AGATGAATAC ACCTATCGCT CTCATTTAGT GCCCATTAAC
TCTGAATACG GTTTTCACGG TGCCATGGCA TCTTTACCGA ACGTGTCCAC ATTTAAGCGC
GTGGAAGATT ATCAAGCTTA CATTAGCCGC TTAAATGCTT TACATGACTA CTTTGATCAG
CAGATAACAT ATATGAAGCA GGCATTAAAA GAGGGCTATA CGCAGCCTAA AGTGGTGCTT
GAAGGGTTTG AAAATTCGGT GGCGTCATAC ATTGTAGAAA ATGCCGAAGA CAGTGGTTTT
TATTCTCCGT TTACCCGCTT TCCTGAGTAC TTTACTGCCG AACAAAAGTC AGCATTAATT
GAACAAGGCA AAGCAGCGAT AAACACGAGT GTCCTTCCCG CATATCAGGC GTTTTACGAC
TTTATGGTGA ATGAATATAT TCCTAATGCT CGTGAAGATA TTGCTGCCAA TAACTGGCCT
GATGGCGTAG CGTATTACGC CAATCGCGCA AAGCATTATA CGACTACTGA TATGACGCCC
CAAGAAATCC ACGACCTGGG GCTGTCAGAA GTCAAACGCA TCCGCGCGCA AATGCAACAA
ATTGTAGATG AACTTGACTT TGATGGTACG ATTAACGACT TCATCACTTT TTTGCGCAAA
GACCCTCAGT TTTACGCCAC CAGCGCAGAA GACTTATTAA AAGAAGCGTC GTTTATTGCC
AAGAAAATGG ACGCTAAGCT GCCTTCATTA TTTGAATATC TACCGCGAAC GCCCTACGGC
GTTGCTCCTG TGCCTGACGC CATTGCGCCT AAGTACACCA CGGGCCGTTA CATCCACCCT
AGCCGCGATG ATCAACCAGG CTATTACTGG GTAAATACCT ATGCCCTTGA TAAGCGCCCT
TTATATGCAC TACCTGCGCT AACATTACAT GAGGCCGTGC CGGGTCATCA CCTTCAGATA
TCACTGGCAG CAGAACTTGA AGACTTACCA ATGGTACGTC GTAATACTTA TATTTCAGCG
TTTGGTGAAG GCTGGGGCCT GTACTCTGAG TTTTTGGGTA TTGAGGCCGG TATTTATGAA
ACGCCTTACG ACAACTTTGG CCGCTTAAGC TATGAAATGT GGCGCGCATG CCGCTTAGTT
GTTGATACTG GCATGCACAC TATGGGCTGG AGCCGCCAGC AAGCCGTAAA TTATATGATG
GAAAATACTG CCCTTTCTGA GCATAACGTG AATACGGAAA TTGACCGCTA TATTTCATGG
CCCGCGCAAG CGCTGTCTTA CAAAATTGGC GAAATCAAAA TTAAAGCGCT ACGAGAAAAA
GCAGAAAGTG AATTAGGAGA ACGTTTCGAC GTTCGCAAAT TCCACCGCGC TGTTTTAGAA
AATGGCTCGG TTCCACTATT CATTTTAGAA CAACATATCG ATGCGTTTAT AGAAGAACAA
AAGGCTAAAT AA
 
Protein sequence
MYRYLLAALL LICSASSPAK VLNDESLYQL LDDIWQYELS VSPLLASRQG DNTLAHALPD 
ISPEALKAKN EQWRAFQKAL SQYKKEDIST DGYIALLMQQ YRLANYVDEY TYRSHLVPIN
SEYGFHGAMA SLPNVSTFKR VEDYQAYISR LNALHDYFDQ QITYMKQALK EGYTQPKVVL
EGFENSVASY IVENAEDSGF YSPFTRFPEY FTAEQKSALI EQGKAAINTS VLPAYQAFYD
FMVNEYIPNA REDIAANNWP DGVAYYANRA KHYTTTDMTP QEIHDLGLSE VKRIRAQMQQ
IVDELDFDGT INDFITFLRK DPQFYATSAE DLLKEASFIA KKMDAKLPSL FEYLPRTPYG
VAPVPDAIAP KYTTGRYIHP SRDDQPGYYW VNTYALDKRP LYALPALTLH EAVPGHHLQI
SLAAELEDLP MVRRNTYISA FGEGWGLYSE FLGIEAGIYE TPYDNFGRLS YEMWRACRLV
VDTGMHTMGW SRQQAVNYMM ENTALSEHNV NTEIDRYISW PAQALSYKIG EIKIKALREK
AESELGERFD VRKFHRAVLE NGSVPLFILE QHIDAFIEEQ KAK