Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00028 |
Symbol | |
ID | 6777063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 29699 |
End bp | 30631 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642753453 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_002124342 |
Protein GI | 196154853 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.14394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATCAG CAGAGTTACT GGACGGTAAA AATGCCGCTG AAGTAATAGA ACAAGTAAAA AGCTATCTAC TAGGGTTGCA AGATACCATT TGCCAAACCC TTGAACTTGC CGACGGTAAG GGCCAGTTTG TTGAAGACAG TTGGCAGCGC GAAGAAGGGG GCGGTGGACG CTCTCGCGTG CTTAAAAATG GTGCGGTGAT AGAGCAAGGC GGCGTAAACT TTTCCCATGT GTTCGGCAGT CAAATGCCAG CGTCTGCTAC GGCTAATCGT CCGGAGCTTG CAGGGCGAAA CTTTCAGGCA ATGGGAGTAT CTTTAGTTAT TCACCCCCAC AACCCGTATA TTCCCACCTC TCATGCAAAC GTGCGCTTTT TTATTGCAGA AAAAGAGGGC GAAGCACCTA TCTGGTGGTT TGGCGGTGGC TTTGATTTAA CGCCGTTTTA TCCCTTTAAA GACGACGTGG TGCATTGGCA TGATACAGCC AAGAAATTAT GCAAGCCATT CGGTGAAGAC GTATACCCCA AGTACAAAAA ATGGTGCGAT GAGTACTTTT ACTTAAAACA CCGCAACGAA ACCCGTGGCG TAGGTGGGTT GTTCTTTGAC GACCTTAATG AATGGGGCTT CGAGCAGTCA TTCGCTTTTA TGCAGGCGGT TGGCAATGGT TTTATTGATG CTTATGTCCC TATTGTTGAG CGACGCAAGC AAACTGATTA TGGCGAAAGA GAGCGTGATT TTCAGCTTTA TCGCAGAGGT CGCTATGTTG AATTTAATCT AGTATTCGAC CGTGGCACCT TATTTGGTTT GCAAACCGGT GGACGTACGG AATCTATTTT AATGTCTATG CCGCCGTTGG CCCGGTGGGA ATACTGCTAT ACCCCGGCAC CAGGGAGTGC TGAGGCTAAG CTTACGGATT GGCTTAAACC TACTCCGTGG TAA
|
Protein sequence | MTSAELLDGK NAAEVIEQVK SYLLGLQDTI CQTLELADGK GQFVEDSWQR EEGGGGRSRV LKNGAVIEQG GVNFSHVFGS QMPASATANR PELAGRNFQA MGVSLVIHPH NPYIPTSHAN VRFFIAEKEG EAPIWWFGGG FDLTPFYPFK DDVVHWHDTA KKLCKPFGED VYPKYKKWCD EYFYLKHRNE TRGVGGLFFD DLNEWGFEQS FAFMQAVGNG FIDAYVPIVE RRKQTDYGER ERDFQLYRRG RYVEFNLVFD RGTLFGLQTG GRTESILMSM PPLARWEYCY TPAPGSAEAK LTDWLKPTPW
|
| |