Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00017 |
Symbol | |
ID | 6775388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 18846 |
End bp | 19499 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642753442 |
Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
Protein accession | YP_002124331 |
Protein GI | 196154842 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TAGCCGTTAT TTTAAGTGGT AGTGGGGTGT TCGACGGAGC TGAATTGCAT GAATCCGTAT TAACGCTTCT AGCCATCGAA CAAGAAGGGG CAACCTATAC GTGTTTTGCA CCAGATGTAG AGCAATTACA CGTGGTAAAT CATTTAACCG GTGAAGTATC AGAAGGCGAG ACTCGAAACG TACTTGTAGA GTCTGCGCGC GTGGCGCGGG GTGACATCAA GCCCGTCACT GAATGCGATG TAAACGCATT CGACACGCTA ATTGTGCCAG GTGGCTTTGG TGCCGCTAAG AACTTTTGTA CATTCGCGGT AGACGGCGAA AACTGCTCGT TTAATGAAGA CGTGTTAAAT GTGTGCAAGT CCTTTGCTCA GGCGAAAAAG CCAGCCGCCT ATGCCTGTAT TGCTCCAGTA TTGGCTGCCA AGGTATACGG TAACCACGTA AAGCTGACTA TTGGTAACGA TGAGGGCACG GCTAATGGTG TCAATGCGTT AGGTGCATCA CACGTAGATT GTAAAGTCGA TGAAGTGGTC GTTGATAATG ATGCCAAACT TGTCACCACC CCTGCTTATA TGTTGGCTGA AAGTGTTTCT CAAGCCCATA GCAGCATCAC TAAAATGGTT AAAACCGTAT TAGCAATGAA ATAG
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Protein sequence | MKKVAVILSG SGVFDGAELH ESVLTLLAIE QEGATYTCFA PDVEQLHVVN HLTGEVSEGE TRNVLVESAR VARGDIKPVT ECDVNAFDTL IVPGGFGAAK NFCTFAVDGE NCSFNEDVLN VCKSFAQAKK PAAYACIAPV LAAKVYGNHV KLTIGNDEGT ANGVNALGAS HVDCKVDEVV VDNDAKLVTT PAYMLAESVS QAHSSITKMV KTVLAMK
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