Gene M446_7020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_7020 
Symbol 
ID6020328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010373 
Strand
Start bp38037 
End bp39386 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content66% 
IMG OID641568630 
Producthypothetical protein 
Protein accessionYP_001691269 
Protein GI169825376 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5434] Endopolygalacturonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.361507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.742896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC TTACCGCACG CGCCGTTCTG GTTGCAACGG CAGGCTTGAT GACCGTCGGC 
GCCACTCATT CGGCACAGTC CCAGGACAGG CGAAACGTCC AGGAGCCGGT TCCGCCGACG
CAGGTCTGCG CAGTCCTGAG TGCGGACGAC GCTCCGTCGG CCAAGGTCGG ACAAGCGAAA
TTGCAGGCCG CCCTGGACGG CTGCCGGACG GGCCAAGCGG TGCGGCTCAC GCCCAGCAGG
ACGAAGGCGG TGTTCGCGAG CGGGCCGATC GAGATGCGGG CCGGCGTGGT TCTCTGGCTC
GACGCCGGGG CCGTGCTCGC CGCCGAGCCC GATCCTCGCC TCTACGACCT CGGCGACGGC
CGTTGCGGAC TGATCAATAA CGCGGGGGGG GGATGCCGGC CTTTCCTCAA TTTTCACAAG
GCCAACGGCG CGGGCCTGAT GGGCGACGGC ACGATCGACG GCCAGGGCGG GGCGGTCATG
ATCGGCAAGG CGGAGACCTG GTGGGCCCTG GCCAGTCGCG CTCAGGTCGA GGGTAGGGAG
CAGAACGTCC CCCGGCTGGT GCAGATCGAC AGCTCGAACA ACATCACCGT ATACCGGATC
ACGCTGCGCA ACGCGCCGAA CGTACACATC GCCATGAACA AGGTCCAGGG CGTGACGGTG
TGGGGCGTCA CCATCAACAC CCCGGCCGAT GCCCGAAACA CGGACGGGAT TGATCCAGGC
GCGGCGATGG ACGTGACCAT CGCCCGCACC TTCATCAGCA CCGGCGACGA CGACATCGCC
ATCAAGGCCG GCGACAACGG AGCGACCCGC CACGTCTCCA TCTTGGACAT CCACATCTAT
TCGGGGCACG GGCTCTCGAT TGGCAGTGAG ACGAACAGTG GCGTCAGCGA CGTCCTCGTC
CGAAACGTCA CCATCGACGG CGCGGTGTCA GGCCTGAGAA TCAAGAGCGA TCCGAGTCGG
GGCGGTTTGG TGCAGGCGGT CCGCTACGAG AACGTTTGCG TGCGCGGAAG TCGGCGGCCG
ATCGACTTCG ACACGCGCTA TGATCCACGC GCTCAGGGTA CGAAGATCCC CGTGTATAGC
AACATCGTCC TGCGCCAAGT TGCCGGAGAG GGCGGTCGGC TGGTCATGCA CGGGTACGAC
GCCGCTCACC CCTTGGGCGT TTCGCTGGAT GGCGTTCGCT TCGTCGACAA CGCGACGTGG
GACGTGGTCA ACACCCAGGC CATCGTCATG GCGGGTGGCG TGACCCCGCC GATTGGCGCC
CCGGCGGCGG CGTGGTCGGC GGTCAACGGG CCGAACTGCA AGGCTCTTTG GACGCCGTTT
CCGGGCGACA CGGCGGTGCA GTCCCATTGA
 
Protein sequence
MKVLTARAVL VATAGLMTVG ATHSAQSQDR RNVQEPVPPT QVCAVLSADD APSAKVGQAK 
LQAALDGCRT GQAVRLTPSR TKAVFASGPI EMRAGVVLWL DAGAVLAAEP DPRLYDLGDG
RCGLINNAGG GCRPFLNFHK ANGAGLMGDG TIDGQGGAVM IGKAETWWAL ASRAQVEGRE
QNVPRLVQID SSNNITVYRI TLRNAPNVHI AMNKVQGVTV WGVTINTPAD ARNTDGIDPG
AAMDVTIART FISTGDDDIA IKAGDNGATR HVSILDIHIY SGHGLSIGSE TNSGVSDVLV
RNVTIDGAVS GLRIKSDPSR GGLVQAVRYE NVCVRGSRRP IDFDTRYDPR AQGTKIPVYS
NIVLRQVAGE GGRLVMHGYD AAHPLGVSLD GVRFVDNATW DVVNTQAIVM AGGVTPPIGA
PAAAWSAVNG PNCKALWTPF PGDTAVQSH