Gene M446_6716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6716 
Symbol 
ID6131416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7393661 
End bp7394380 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID641646801 
ProductLexA repressor 
Protein accessionYP_001773400 
Protein GI170744745 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC GTAAGCAGTT GGACCTGCTC CGCTTCATCC AGCAGCGGAT GCGCGAGACC 
GGCGTCCCGC CCTCCTTCGA CGAGATGAAG GACGCCCTCG ACCTCAAGTC CAAGTCCGGC
ATCCACCGTC TCATCACGGC CCTGGAGGAG CGCGGCTTCC TCCGCCGGCT GCCGAACCGG
GCCCGCGCGA TCGAGGTCAT CCGCATCCCC GAGGCGGTGG CGAGCGGCCC CGCGGAGGTG
GTGCGCTTCA CGCCGAGCGT CGTCGAGGGG GGGCGCTCCT CGGCCCCGGT CAAGCCCGCC
CCGCTGCCGA CCGCCCTGGT CTCCGACGAA TCCGGGCACG CGGTCAGCAT CCCGGTCATG
GGCCGGATCG CCGCCGGCAC GCCGATCTCG GCCATCCAGA GCCAGAGCCG CAGCGTCGCG
ATGTCGCCGG ACTTCCTCGC CGGCGGCGAG CACTACGCCC TGGAGGTGCG CGGCGACTCG
ATGATCGAGG CCGGCATCCT GGACGGGGAC TTGGTGGTGA TCCGCCGCCA GGACACCGCC
AATACGGGCG ACATCGTGGT AGCGCTGATC GACGACGAGG AGGCGACCCT CAAGCGCCTG
CGCCGCCGCG GCTCGTCGAT CGCCCTCGAA GCCGCCAACC CGGCCTACGA GACCCGGGTC
CTTGGGCCCG ACCGGGTCCG CATCCAGGGC CGCCTCGTCA GCCTCATCCG CAAGTACTGA
 
Protein sequence
MLTRKQLDLL RFIQQRMRET GVPPSFDEMK DALDLKSKSG IHRLITALEE RGFLRRLPNR 
ARAIEVIRIP EAVASGPAEV VRFTPSVVEG GRSSAPVKPA PLPTALVSDE SGHAVSIPVM
GRIAAGTPIS AIQSQSRSVA MSPDFLAGGE HYALEVRGDS MIEAGILDGD LVVIRRQDTA
NTGDIVVALI DDEEATLKRL RRRGSSIALE AANPAYETRV LGPDRVRIQG RLVSLIRKY