| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6556 |
|---|
| Symbol | |
|---|
| ID | 6134271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 7210194 |
|---|
| End bp | 7211372 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641646645 |
|---|
| Product | malate--CoA ligase subunit beta |
|---|
| Protein accession | YP_001773246 |
|---|
| Protein GI | 170744591 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.493154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0575552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCC ACGAATACCA GGCCAAGGAA TTGCTGGCGA GCTTCGGCGT GCCGATCCCG
AAGGGCGCGG TCGCCTTCAG CCCCGACCAG GCGGTCTACG CCGCCACCGA ACTCGGCGGC
TGGCACTGGG CCGTGAAGGC CCAGATCCAC GCGGGCGCCC GCGGCAAGGC CGGCGGCATC
CGCCTGTGCA AGACCTACAA CGAGGTCCGG GACGCGGCCA AGGACCTGCT CGGCAAGCGC
CTCGTCACCC ACCAGACCGG CCCCGAGGGC AAGCCGGTCC AGCGCGTCTA CATCGAGACC
GCCGATCCGT TCGAGCGCGA GCTCTATCTC GGCTTCGTCC TCGACCGGAA GGCCGAGCGC
GTGCGCGTCA TCGCCTCGCA GCGCGGCGGC ATGGACATCG AGGAGATCGC CGCCACCGAT
CCCGAGGCCC TGCTCCAGGT CGTGGTCGAG CCGGCGGTCG GCCTGCAGCA ATTCGAGGCC
CGCGAACTCG CCTTCCAGCT CGGCCTCAAC ATCAAGCAGG TCGGCGGGGC GGTGAAGACC
ATCATGAGCG CCTACCGCGC CTTCCGCGAC TGCGACGCCA CCATGCTGGA GATCAACCCG
CTCGTCGTCA CCAAGGACGA CCGGGTGCTG GCCCTCGACG CCAAGATGTC GTTCGACGAC
AACGCGCTGT TCCGGCGCCG CACCATCGCG GACATGTACG ACCCCTCGCA GAGCGACCCG
CGCGAGGCGC AGGCCGCGGA GCACAACCTC AACTACATTG GCCTCGAGGG GGAGATCGGC
TGCATCGTCA ACGGGGCGGG CCTCGCCATG GCGACGATGG ACATGATCAA GCACGCGGGC
GGCGAGCCGG CGAACTTCCT CGACGTCGGC GGCGGCGCGA GCCCCCAGCG CGTCGCCACC
GCCTTCCGCC TCGTCCTCTC GGACCCGAAC GTGAAGGCGA TCCTGGTCAA CATCTTCGCG
GGCATCAACC GCTGCGACTG GATCGCCCAG GGCGTCATCC AGGCCGCCCA GGAGGTCCAG
ATCGGCGTCC CGCTGGTGGT CCGGCTCGCC GGCACCAACG TCGAGGCCGG CAAGGCCATC
CTGGAGAAGA GCGGGCTCGA CCTCATCACC GCCGACACCC TGACGGAAGC CGCCCAGAAG
GCCGTGCAGG CCGTCAAGGG CACCCGCGCG GCGGCCTGA
|
|---|
| Protein sequence | MDVHEYQAKE LLASFGVPIP KGAVAFSPDQ AVYAATELGG WHWAVKAQIH AGARGKAGGI
RLCKTYNEVR DAAKDLLGKR LVTHQTGPEG KPVQRVYIET ADPFERELYL GFVLDRKAER
VRVIASQRGG MDIEEIAATD PEALLQVVVE PAVGLQQFEA RELAFQLGLN IKQVGGAVKT
IMSAYRAFRD CDATMLEINP LVVTKDDRVL ALDAKMSFDD NALFRRRTIA DMYDPSQSDP
REAQAAEHNL NYIGLEGEIG CIVNGAGLAM ATMDMIKHAG GEPANFLDVG GGASPQRVAT
AFRLVLSDPN VKAILVNIFA GINRCDWIAQ GVIQAAQEVQ IGVPLVVRLA GTNVEAGKAI
LEKSGLDLIT ADTLTEAAQK AVQAVKGTRA AA
|
|---|
| |