Gene M446_6435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6435 
Symbol 
ID6129819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7070261 
End bp7070938 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID641646525 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001773128 
Protein GI170744473 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC CTCCCCTTCA GCTCTCGGCC GACGAGGCAA CGCTCCTCGA ACGCGCGCGC 
CGACACGACC CCGCCGCCAT CCGGCTGATC ATCCAGCAGC AGAACCGGCG CCTGTACCGG
ATGGCGCGCA GCATCGTCCG CGACGACAGC GAGGCCGAGG ACGTCCTGCA GGAGGCGTAT
GCGCGCGCCT TCACCCACCT GAGCAGCTTC CGCGGCGACG CGCGCCTCGG CACTTGGTTG
GCCCGCATCG TCATCAACGA GGCGCTCGGC CGGTTGCGGC ACCGCCGCCC GACGCTGGAT
CTGAGTGCCG TCGCGGCGCC CACGACGGGC GCCCAGATCA TTCCGTTCCC GGACGTCGGC
GGTCAACTCG ACCCGGAAGC TCTCATGGCG CAGCGGCAGA TCCGCACCCT GCTTGAGCTC
GCCATCGACC GGCTTCCCGA CGCGTTCCGC ACGGTGCTGA TCGCACGCTT GGTGGAAGGC
CTGAGCACCG AGGATACCGC GGAGTTGCTC GGCCTCAGGC CGGAGACGGT CAGGACCCGC
CTGCACCGCG CACGGCTGCT GCTGAAACGC GATCTGGAGG AGCAGATAGG GCCCGTCCTG
GCGGACGCGT TTCCGTTCGC GGGCGTCCGC TGCGCGCGTT TGACCGACGC GGTGCTGGAG
CGGCTCGGCC TCACGTGA
 
Protein sequence
MIEPPLQLSA DEATLLERAR RHDPAAIRLI IQQQNRRLYR MARSIVRDDS EAEDVLQEAY 
ARAFTHLSSF RGDARLGTWL ARIVINEALG RLRHRRPTLD LSAVAAPTTG AQIIPFPDVG
GQLDPEALMA QRQIRTLLEL AIDRLPDAFR TVLIARLVEG LSTEDTAELL GLRPETVRTR
LHRARLLLKR DLEEQIGPVL ADAFPFAGVR CARLTDAVLE RLGLT