Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6391 |
Symbol | |
ID | 6130292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 7021753 |
End bp | 7023744 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641646485 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001773089 |
Protein GI | 170744434 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.144066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCACCGC TCAGCCTTCC CCTCCTCGAT CGCGTCCGTG ATCCGTCGGA GCTTCGCGCC CTGCCGGAGA GCGACCTGGC GCAGCTCGCC GCGGAACTGC GCGCCGAGAC CATCGACGCG GTCTCGGTCA CCGGCGGCCA TCTCGGCGCG GGGCTGGGCG TGGTCGAACT CACGGTCGCC CTGCACTACG TCTTCCACAC TCCCGACGAC CGCCTGATCT GGGACGTCGG CCACCAGGCC TACCCGCACA AGATCCTCAC CGGCCGGCGC GACCGCATCC GCACCCTGCG CCAGGGCGGC GGCCTCTCCG GCTTCACCAA GCGCGCCGAG AGCCCCTACG ATCCCTTCGG CGCCGCCCAC TCCTCCACCT CCATCTCCGC CGGCCTCGGC ATGGCCGTCG CCCGCGACCT CGCCGAGGCC GCCGCCCGCG CCCGCGGCGA GACCCCCGAG CGCCGCAACG TCGTGGCGGT CATCGGCGAC GGATCCATCT CCGCCGGCAT GGCCTACGAG GCCATGAACA ACGCCGGCGC CCTGCGCTCC CGCCTCGTCG TCATCCTCAA CGACATGTCC ATCGCGCCCC CGGTCGGCGC CATGTCGGCC TACCTCGCCC GCCTGGTCTC CGGCGACACC TACCGCTCCC TGCGCGACAC CGCCCGCCAG TTCGGCCGCC TGCTGCCCAA GGCCCTCTAC GACACCGCCG TGCGCGCCGA GGAATACGCC CGCGGCATCC TGGCGGGCGG CGGCACCATG TTCGAGGAGC TCGGCTTCCA CTACGTCGGC CCGATCGACG GCCACAACCT CGACCACCTG CTGCCCATCC TCAAGAACGT CCGCGACGCG CCCGAGGGGC CGGTCCTGGT CCACGTCGTC ACCCAGAAGG GCAAGGGCTA CGCCCCCGCC GAGGCCGCCG CCGACCGCGG CCACGCCGTG GTCAAGTTCG ACGTCGTCTC CGGCCAGCAG GTCAAGGCCA AGGCCAACGC CCCGACCTAC ACCCGGGTGT TCGGCGAGAG CCTGGTCAAG GCGGCGGACG CCGACGACAA GGTGGTGGCG ATCACCGCCG CGATGCCCTC CGGCACCGGG GTCGACCTGT TCGCCAAGGC CCATCCGGGG CGCACCTTCG ACGTCGGCAT CGCCGAGCAG CACGCCGTGA CCTTCGCGGC CGGGCTGGCG GCGGAGGGCT ACCGGCCGTT CTGCGCGATC TACTCGACCT TCCTGCAGCG GGCCTACGAC CAGGTCGTGC ACGACGTGGC GCTGCAGAAC CTGCCGGTGC GCTTCGCGCT CGACCGGGCC GGCCTGGTCG GGGCGGACGG GGCGACGCAT GCGGGGGCCT TCGACCTGGC CTACCTGTGC TGCCTGCCCA ACATGGTGGT GATGGCGGCC GCCGACGAGG CGGAGCTGGT GCACATGGTG GCGACCGCCC ACGCGCACGA TGCCGGCCCG ATCGCCTTCC GCTACCCGCG GGGCGAGGGG GTGGGGGTGG ACCTGCCCGA GAAGGGCGAG GTTCTGGCGC TGGGCCGCGG CCGGGTGATC CGGCGCCCGG AGGGGGCGCG GGTGGCGCTG GTGAGCCTGG GGACGCGCCT GGCGGAGGCG CTGAAGGCGG CCGAGCAGCT GGAGGAGCGC GGGATCGGGG TGACGGTGGC GGATGCGCGC TTTGCCAAGC CGCTGGACGA GGGGCTGCTG CTGGATCTTG CGGGCAGCCA CGAGGTGCTG GTGACGGTGG AGGAGGGCTC GACCGGGGGC TTCGGCGCGA TGGTGCTGCA CCTGCTCGCG GGGCGCGGGG CGCTGGATGC CGGGACGGTG CGGGTGCGCA CGCTGACCCT GCCGGACAGC TACCAGGACC ACGACACGCC CGAGCGCATG TACGCCCAGG CCGGCCTCGA CGCCCCCGCC ATCGTCCGAG CCGTCGAGCA CGCGCTCCCG GACGAGCCGC GGGCCGCCAA GCGGCCCGCG CGCGACTCGA ACGTGGTGAG CGTCTCCCGC CGCCCGCGCT GA
|
Protein sequence | MSPLSLPLLD RVRDPSELRA LPESDLAQLA AELRAETIDA VSVTGGHLGA GLGVVELTVA LHYVFHTPDD RLIWDVGHQA YPHKILTGRR DRIRTLRQGG GLSGFTKRAE SPYDPFGAAH SSTSISAGLG MAVARDLAEA AARARGETPE RRNVVAVIGD GSISAGMAYE AMNNAGALRS RLVVILNDMS IAPPVGAMSA YLARLVSGDT YRSLRDTARQ FGRLLPKALY DTAVRAEEYA RGILAGGGTM FEELGFHYVG PIDGHNLDHL LPILKNVRDA PEGPVLVHVV TQKGKGYAPA EAAADRGHAV VKFDVVSGQQ VKAKANAPTY TRVFGESLVK AADADDKVVA ITAAMPSGTG VDLFAKAHPG RTFDVGIAEQ HAVTFAAGLA AEGYRPFCAI YSTFLQRAYD QVVHDVALQN LPVRFALDRA GLVGADGATH AGAFDLAYLC CLPNMVVMAA ADEAELVHMV ATAHAHDAGP IAFRYPRGEG VGVDLPEKGE VLALGRGRVI RRPEGARVAL VSLGTRLAEA LKAAEQLEER GIGVTVADAR FAKPLDEGLL LDLAGSHEVL VTVEEGSTGG FGAMVLHLLA GRGALDAGTV RVRTLTLPDS YQDHDTPERM YAQAGLDAPA IVRAVEHALP DEPRAAKRPA RDSNVVSVSR RPR
|
| |