Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6372 |
Symbol | |
ID | 6133417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6999884 |
End bp | 7000624 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641646466 |
Product | LemA family protein |
Protein accession | YP_001773070 |
Protein GI | 170744415 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00757602 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.786314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA AGCGGAACGG GGGCGTCCGG GACGCCCGCT CCTTGCCGTC TCAATCCCGG CCGTCTCAAT CCCGGCCATC TCAATCCCGG CCATCTCAAT CTCGGCCGTC CCGGACTTCG CCGTCCAGGA CTTCGCCGTC CAGGATCTGG CCGTCCCGGG TCGTCGGCGC CCTCGCCCTC GTCGCGGTGG CGGGCGGCCT CTCGGGCTGC GGTGCCGTCA ACCGGGTGCC GGTCCTGGAG GAGCAGGCGA AATCCGCCTG GAGCGAGGTC CAGAACCAGT ATCAGCGCCG CACCGACCTG ATCCCGAACC TCGTCGAGAC CGTGAAGGGC TACGCGCAGC AGGAGAAGGA CGTCCTGATC GGCGTCACCG AGGCCCGCGC CAAGGCCACG AGCGTCAAGG TCGATGCCGG CACGGTCAGC GACCCGCAGA AGTTCAAGGA GTTCCAGGAC GCGCAGAACC AGCTCTCGGG GGCGCTGGGG CGGCTCCTGG TCACGGTCGA GCGCTACCCC GACCTCAAGT CGAACCAGAA CTTCCTCGCC CTGCAATCGC AGCTCGAAGG CACCGAGAAC CGGATCGCGG TGGCGCGGCG CGACTACATC GCGGCGGTGC GGGCCTACAA CACCGAGGTG CGCACGATCC CGGGGCGCTG GATCGCCGGG ATCCTCTATC CCGATGCGAA GCCGATGGAG ACCTTCACGG CGACGCCCGA CGCCGCGCGC CCGCCGAACG TAAAGTTCTA G
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Protein sequence | MSAKRNGGVR DARSLPSQSR PSQSRPSQSR PSQSRPSRTS PSRTSPSRIW PSRVVGALAL VAVAGGLSGC GAVNRVPVLE EQAKSAWSEV QNQYQRRTDL IPNLVETVKG YAQQEKDVLI GVTEARAKAT SVKVDAGTVS DPQKFKEFQD AQNQLSGALG RLLVTVERYP DLKSNQNFLA LQSQLEGTEN RIAVARRDYI AAVRAYNTEV RTIPGRWIAG ILYPDAKPME TFTATPDAAR PPNVKF
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