| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6347 |
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| Symbol | |
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| ID | 6134918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 6973249 |
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| End bp | 6975240 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641646441 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001773045 |
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| Protein GI | 170744390 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.323444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.123319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCAAGG TCGAGACGCT CCACCGCACG AGCACGCAGG ACATCACGCT CGACGACGTC
GAGCGGCGCG TCACGCTCGC GTCGAAGGCT CTCATGCGGC TCGCGAACGC GGACGGGCAC
TGGTGCTTCG AGCTGGAGGC CGACGCCACC ATTCCGTCCG AGTACATCCT CTACCATCAT
TTCCGCGGCT CGATCCCGAC GGCCGAATTG GAGGGGAAGA TCGCCGCCTA CCTGCGCCGC
ACCCAGAGCG CGCAGCACGA CGGCTGGGCC CTGATCCATG ACGGCCCCTT CGACATGAGC
GCGACCGTCA AGGCCTACTT CGCCCTCAAG ATGGTCGGCG ACCCGATCGA CGCGCCCCAC
ATGCGCCGGG CCCGCGACGC GATCCTGCGC CGGGGCGGCG CCGCCCACGC CAACGTCTTC
ACCCGGATCA TGCTCGCCCT CTACGGCGAG GTGCCGTGGA CCGCCGTGCC GGTGATGCCG
GTCGAGGTGA TGCTGCTGCC GCGGTGGTTC CCCTTCCACC TCGACAAGGT CTCCTACTGG
GCCCGCACCG TGATGGTGCC GCTCTTCGTC CTGCAGGCCA AGAAGCCGCG GGCCCGCAAC
CCGCGCGGCA TCGGCATCCG CGAACTCTTC GTCGAGGCGC CCGAGCGCGT GAAGCGCTGG
CCGGCCGGCC CGCAGGAATC CTCGCCCTGG CGCCCGGTCT TCGCGGCCAT CGACAAGGTG
CTGCAGAAGG TCGAGGGCTT CTTCCCGGCC GGCTCGCGGG CGCGGGCGAT CGACAAGGCG
GTGGCCTTCG TCAGCGAGCG CCTGAACGGC GAGGACGGGC TCGGCGCGAT CTTCCCAGCC
ATGGTCAACA CCGTGCTGAT GTTCGAGGCG CTCGGCTACC CGGACGACCA CCCCTTCGCG
GTCACGGCCC GCTCTTCGGT CGAGAAGCTC GTCACCGTCA AGGAGCACGA GGCCTACGTC
CAGCCCTGCC TGTCCCCGGT CTGGGACACG GCGCTCGCCG CCCACGCCCT GATGGAAGCC
GGCGGGACCG AGGCGGAGCG CCACGCCAAG CGCGCCATGG ACTGGCTGAA GCCCCTGCAG
GTGCTCGACA TCAAGGGCGA CTGGGCGGCC TCCAAGCCGG ACGTGCGGCC GGGCGGCTGG
GCCTTCCAGT ACGCCAACCC GCACTACCCG GACCTCGACG ACACCGCGGT CGTGGTGATG
GCCATGGACC GGGTGCAGAG CCGCCGCAGC CCCGGGCCCG ACGCGGCCGA TTACGGGCTC
TCGATCGCCC GCGCCCGCGA ATGGGTCGAG GGCCTGCAGA GCCGCGACGG CGGCTGGGCG
GCCTTCGACG CGGACAACAC CTACCACTAC CTCAACTACA TTCCGTTCTC GGATCACGGG
GCGCTGCTCG ACCCGCCGAC CGCCGACGTG ACGGCGCGCT GCGTCTCGAT GCTGTCCCAG
CTCGGCGAGA CCCGGGAGAC CTGCCCGCCC CTCGACCGCG GCGTCGCCTA CCTGCTCGCC
GATCAGGAGG CGGATGGCAG CTGGTACGGC CGCTGGGGCA TGAACTACAT CTACGGGACG
TGGTCGGTGC TCTGCGCCCT CAACGCGGCC GGGATCGACC CCGCCTGCGA GCCGGTGCGG
CGGGCGGTGA CCTGGCTCAC CGCGATCCAG AACCCCGACG GCGGCTGGGG CGAGGACGCG
TCGAGCTACA AGCTCGAATA TCGCGGCTAC GAGCGGGCGC CGAGCACGGC CTCGCAGACC
GCCTGGGCGC TGCTCGCGCT GATGGCGGCC GGCGAGGCGG ACAACCCGGC CGTGGCGCGC
GGCATCAACT ACCTGACCCG CACCCAGGGG GCGGACGGGC TCTGGGCCGA GGACCGCTAC
ACGGCGACCG GGTTCCCGCG CGTCTTCTAC CTGCGCTACC ACGGCTACGC GAAGTTCTTC
CCCCTCTGGG CGCTGGCCCG CTACCGCAAC CTCCAGCGGG GCAACAGCCT CAAGGTGGCG
GTGGGGATGT GA
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| Protein sequence | MGKVETLHRT STQDITLDDV ERRVTLASKA LMRLANADGH WCFELEADAT IPSEYILYHH
FRGSIPTAEL EGKIAAYLRR TQSAQHDGWA LIHDGPFDMS ATVKAYFALK MVGDPIDAPH
MRRARDAILR RGGAAHANVF TRIMLALYGE VPWTAVPVMP VEVMLLPRWF PFHLDKVSYW
ARTVMVPLFV LQAKKPRARN PRGIGIRELF VEAPERVKRW PAGPQESSPW RPVFAAIDKV
LQKVEGFFPA GSRARAIDKA VAFVSERLNG EDGLGAIFPA MVNTVLMFEA LGYPDDHPFA
VTARSSVEKL VTVKEHEAYV QPCLSPVWDT ALAAHALMEA GGTEAERHAK RAMDWLKPLQ
VLDIKGDWAA SKPDVRPGGW AFQYANPHYP DLDDTAVVVM AMDRVQSRRS PGPDAADYGL
SIARAREWVE GLQSRDGGWA AFDADNTYHY LNYIPFSDHG ALLDPPTADV TARCVSMLSQ
LGETRETCPP LDRGVAYLLA DQEADGSWYG RWGMNYIYGT WSVLCALNAA GIDPACEPVR
RAVTWLTAIQ NPDGGWGEDA SSYKLEYRGY ERAPSTASQT AWALLALMAA GEADNPAVAR
GINYLTRTQG ADGLWAEDRY TATGFPRVFY LRYHGYAKFF PLWALARYRN LQRGNSLKVA
VGM
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