| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6027 |
|---|
| Symbol | |
|---|
| ID | 6135927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6614218 |
|---|
| End bp | 6615429 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641646126 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001772738 |
|---|
| Protein GI | 170744083 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.11639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.400144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCG CCCCGTCTTC CGCCCTGCCG CAGAACGCCG CGCTGCCGGC CCTCACCCCG
GCGACGCGCC TCAGCCTGAG CCTGATCGCG GGCGGGGCCG TGGCGAACAT CTACTACAAC
CAGCCGCTCC TCGCCGTGCT GGCGCAGGAT CTCGGCGCGG CGGCGTCGAG CCTGGTCCCG
ACCGCGACGC TCGCCGGCTA CGGGCTCGGG ATCCTCGGCC TCGTCCCGAT GGGGGACCGC
TACCCGCGCC GCGGGCTGAT CGTCGGCCAG CTCCTGCTGC TCTCGGGCGC GCTGGTGCTG
GCGGCCCTGG CCCCGGGGCT CGGCACGCTG GCGGCGGCGA GCTTCCTGAT CGGCGTCCTG
TCGACGGCGG CCCAGCAGGC GGTGCCCTTC GCGGCCGAAC TCGCCCCGGA CGCCAGCCGC
GGCCGGATGG TCGGCCAGGT GATGACCGGG CTCCTGCTCG GCATCCTGCT CGCCCGGACC
CTGAGCGGGC TCGTGGGGGC GTGGTTCGGC TGGCGGGCGA TGTTCGGCGC CGCCTGCGGC
CTCTCCCTCG CCCTCGCCGC CCTGGCGGCC CTGACCCTGC CGGCGACCCG GGCCGCCACC
CGCCTGCCCT ACGGCGCGCT GATGGCCTCG GTCCTCGACC TCGCCCGGGG CCAGGCGCCC
CTGCGGCGCG CGGCGCTGTC CCAGGCGCTG CTCTTCGCCG CCTTCAACGC CTTCTGGACC
AGCCTCGCCC TGTTCGTGGA GGGACCGCCC TTCCGCCTCG ATCCGGCCGG GGCCGGGCTG
TTCGGGCTGA TCGGCGCCGC GGGCGCCCTC TGCGCGCCCT ATGCGGGGCG CTTCGCCGAC
GCGAAGAGCC CGCGGCCGGT GGTGATCGGC GGCGCGCTGC TGACGCTCGC CTCCTTCGCG
GTGTTCGGGC TCCTCGGCGG CCGCTCCCTC GCCGCGATGG CCCTCGGCGT GCTCCTCATC
GACATCGGCA TCAACACGGC GCTGATCGCC AACCAGACCC GGGTCTACGC GCTGGCGGCG
GGGGCGCGGG GGCGGATCAA CACGGTGTTC TTCACGGCGG TGTTCATCGG CGGCGCCCTC
GGCGCCTCGG CGGGCACCCG CGCCTTCGCG GCGGGGGGCT GGCCGCTGCT CTGCCTCGTC
GGCGGCGCCT TCGCGGCGGC GGGGGTGGTG GTGCCGCTGC TGGAACCCAG GGCCGGGCCC
CGGGGGGCGT GA
|
|---|
| Protein sequence | MTSAPSSALP QNAALPALTP ATRLSLSLIA GGAVANIYYN QPLLAVLAQD LGAAASSLVP
TATLAGYGLG ILGLVPMGDR YPRRGLIVGQ LLLLSGALVL AALAPGLGTL AAASFLIGVL
STAAQQAVPF AAELAPDASR GRMVGQVMTG LLLGILLART LSGLVGAWFG WRAMFGAACG
LSLALAALAA LTLPATRAAT RLPYGALMAS VLDLARGQAP LRRAALSQAL LFAAFNAFWT
SLALFVEGPP FRLDPAGAGL FGLIGAAGAL CAPYAGRFAD AKSPRPVVIG GALLTLASFA
VFGLLGGRSL AAMALGVLLI DIGINTALIA NQTRVYALAA GARGRINTVF FTAVFIGGAL
GASAGTRAFA AGGWPLLCLV GGAFAAAGVV VPLLEPRAGP RGA
|
|---|
| |