Gene M446_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6001 
Symbol 
ID6132243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand+ 
Start bp6588022 
End bp6589029 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID641646100 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001772712 
Protein GI170744057 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.019429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA AGGTCGCCAT CAACGGCTTC GGACGCATCG GGCGCAACGT CCTGCGCGCC 
ATCAAGGAGG CGGGGCGCAC GGACGTCGAG GTCGTCGCCA TCAACGATCT CGGGCCGGTC 
GAGACCAACG CCCACCTGCT GCGCTACGAT TCCGTGCACG GCCGCTTCCC GGGCGAGGTG 
AAGGTCGAGG GCGACGCCAT CGTGGTCGAC GGCCAGCGCA TCCGCGTCAC CGCGATCAAG 
AGCCCGGCCG AGCTGCCCCA TCGCGAGCTC GGCGTCGACA TCGCCCTGGA ATGCACCGGC 
ATCTTCACGG CGCGCGACAA GGCCAAGGCC CACCTGGACG CGGGCGCCAA GCGCGTCATC 
GTCTCGGCCC CCTCGGACGG CGCCGACCTC ACCGTCGTGT ACGGCGTCAA CCACGACAAG 
CTGACCGCCG ACCACCTCGT GATCTCGAAC GCCTCCTGCA CGACGAACTG CCTCGCGCCG 
GTCGCCAAGG TGCTCAACGA CGCGGTCGGG ATCGAGCGCG GCTTCATGAC GACGATCCAC 
TCCTACACCA ACGACCAGCC GTCGCTGGAT CAGATGCACA AGGATCTCTA CCGGGCCCGC 
GCCGCGGCCC TGTCGATGAT CCCGACCACG ACGGGCGCCG CCAAGGCGGT GGGCCTCGTC 
CTGCCGGAGC TGAACGGCAA GCTCGACGGC ACCTCGATCC GGGTGCCGAC CCCGAACGTC 
TCGGTCGTCG ACTTCAAGTT CGTGGCCAAG CGCGCCACCT CGGTCGCCGA GATCAACGAG 
GCGATCAAGG CGGCGGCGAA CGGGCCGCTC AAGGGCGTGC TCGGCTACAC CGAGGCCCCG 
AACGTCTCGA TCGACTTCAA CCACGACCCG CATTCCTCGA CCTTCCACAT CGACCAGACC 
AAGGTGATGG ACGGGACCTT CGTGCGGGTG CTGTCCTGGT ACGACAACGA GTGGGGCTTC 
TCGAACCGCA TGGCCGACAC CGCGGTCGCC CTCGCCAAGC TGATCTGA
 
Protein sequence
MTVKVAINGF GRIGRNVLRA IKEAGRTDVE VVAINDLGPV ETNAHLLRYD SVHGRFPGEV 
KVEGDAIVVD GQRIRVTAIK SPAELPHREL GVDIALECTG IFTARDKAKA HLDAGAKRVI 
VSAPSDGADL TVVYGVNHDK LTADHLVISN ASCTTNCLAP VAKVLNDAVG IERGFMTTIH 
SYTNDQPSLD QMHKDLYRAR AAALSMIPTT TGAAKAVGLV LPELNGKLDG TSIRVPTPNV 
SVVDFKFVAK RATSVAEINE AIKAAANGPL KGVLGYTEAP NVSIDFNHDP HSSTFHIDQT 
KVMDGTFVRV LSWYDNEWGF SNRMADTAVA LAKLI