Gene M446_5983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5983 
Symbol 
ID6131195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6570463 
End bp6571065 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID641646082 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001772694 
Protein GI170744039 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0728154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACC TCGCCATGCT CCACCCCGAC ACGCCGCCGG CTTCCCCGAA GGCCGCGATC 
CCGCCGCCCG ATCCCGACGC GGACCTGGTC GCGCGAGCGG GGCAGGGCGA TCGAGCGGCC
TTCGAGACGC TGCTGCGGCG CCACTACGAC CGGCTGCACC GCGTCGCGTG GCGCATGACC
GGCTCCCGGG AGGATGCGGA GGACCTCGTG CAGGAGGTCT GCTGCGCCCT GCCGGCCAAG
CTCGCCGGGT TCCGGGGCGA GGCGCGGGTC GCGACCTGGC TCACCGGGAT CCTGATCAAT
GCCTGCCGCG ACCATCACCG CCGCCGGGGC GCGCTGGACC GGCTCCGGCG GGGGCTCGCC
GTCTGGGCCG GCCTCGCCCG GCCCCCCGAC GGACGCGACC TCTACCGGCG GTCTTGGCTC
GCAGGGGAAC TCGCCCGGCT CGACCCGGCC CTGCGCGCGA CCGTCATCCT GGTCCACGGC
GAGGGACTGA CCCACGCCGA GGCGGCCGCC GTTCTCGGCC TCGCCGAATC CACCGTCTCG
TGGCGCCTGC ACGACCTGCG CCGCCGTCTC AAGGCCTCCG GGGAGGAAAG CCATGGCGCC
TGA
 
Protein sequence
MRDLAMLHPD TPPASPKAAI PPPDPDADLV ARAGQGDRAA FETLLRRHYD RLHRVAWRMT 
GSREDAEDLV QEVCCALPAK LAGFRGEARV ATWLTGILIN ACRDHHRRRG ALDRLRRGLA
VWAGLARPPD GRDLYRRSWL AGELARLDPA LRATVILVHG EGLTHAEAAA VLGLAESTVS
WRLHDLRRRL KASGEESHGA