Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5983 |
Symbol | |
ID | 6131195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6570463 |
End bp | 6571065 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641646082 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001772694 |
Protein GI | 170744039 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0142297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0728154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGACC TCGCCATGCT CCACCCCGAC ACGCCGCCGG CTTCCCCGAA GGCCGCGATC CCGCCGCCCG ATCCCGACGC GGACCTGGTC GCGCGAGCGG GGCAGGGCGA TCGAGCGGCC TTCGAGACGC TGCTGCGGCG CCACTACGAC CGGCTGCACC GCGTCGCGTG GCGCATGACC GGCTCCCGGG AGGATGCGGA GGACCTCGTG CAGGAGGTCT GCTGCGCCCT GCCGGCCAAG CTCGCCGGGT TCCGGGGCGA GGCGCGGGTC GCGACCTGGC TCACCGGGAT CCTGATCAAT GCCTGCCGCG ACCATCACCG CCGCCGGGGC GCGCTGGACC GGCTCCGGCG GGGGCTCGCC GTCTGGGCCG GCCTCGCCCG GCCCCCCGAC GGACGCGACC TCTACCGGCG GTCTTGGCTC GCAGGGGAAC TCGCCCGGCT CGACCCGGCC CTGCGCGCGA CCGTCATCCT GGTCCACGGC GAGGGACTGA CCCACGCCGA GGCGGCCGCC GTTCTCGGCC TCGCCGAATC CACCGTCTCG TGGCGCCTGC ACGACCTGCG CCGCCGTCTC AAGGCCTCCG GGGAGGAAAG CCATGGCGCC TGA
|
Protein sequence | MRDLAMLHPD TPPASPKAAI PPPDPDADLV ARAGQGDRAA FETLLRRHYD RLHRVAWRMT GSREDAEDLV QEVCCALPAK LAGFRGEARV ATWLTGILIN ACRDHHRRRG ALDRLRRGLA VWAGLARPPD GRDLYRRSWL AGELARLDPA LRATVILVHG EGLTHAEAAA VLGLAESTVS WRLHDLRRRL KASGEESHGA
|
| |