Gene M446_5948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5948 
Symbol 
ID6132764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6539951 
End bp6541027 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content72% 
IMG OID641646050 
Productplasmid encoded RepA protein 
Protein accessionYP_001772662 
Protein GI170744007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.087033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0313966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG AGGCCAAGAT CGAGGCGATC CGCGACGAGG ATCTGAGGGC GGAGCTCGAG 
GCGGCCCGCG GCAGCTTCCT GTTCGCGGTG ATCGTCGAGA CCATCGCCCA CCGGCAGGCC
CAGCGCGACG CCGAGCGGGA GGCGGCGGCG CGCGCGGCCG AGGCGCGCGC CGGCATGTCC
CGCGACCAGC GCCGCCGGGA CGCCGTGCGG GCGGTGATCG AGACCGAGCC CGTCGCCCCC
GAGAACATCC AGCACATCCA CTCGGTGCTG GCCCTGTGCG GGCTGCCCTA CCGCGATCCG
GGCGAGACGC GGGAGTTCTT CCGCGAGTAC GGCCGCAACA CGCTCAGCAT CCTGGCCGGG
CGGATCAAGA ACCCGGCGAC CGGCCAGATG GAGCTGCAGG GCCTGCCCTA CGGCCCGAAG
GCCCGCCTCG TGCTCCTGCA CCTCTGCACC GAGGCGGTGC GCCAGCGCAG CCCCACCATC
GAGGTCGCCG ACAGCCTGTC GGGCTTCATG CGCGAGATGG GCTTCGCGGT GACGGGGGGC
GAGCGCGGCA CCATCCGGCA GTTCAAGGAG CAGCTCAACC GCCTCGCCGC CTGCACCCTG
CAGATCGGCC TCTGGGACGG CCAGTCCCGC TCCTCCACCC TGACCATGCC GCCCTTCCGC
AAGCTCGACC TCTGGCGGGG CGAGGGGCAG GCCGCTGCCT GGTCGAAGAC CGTGCAGTTC
CACCAGGATT TCTACGAGAA CCTGGTCAAG CACGCGCTGC CGGTGGACAT CCGGGCCGCC
CGGGCCTTCG CGGGCTCGGC CCGCAAGCTC GACCTCCTGT TCTGGGTCGG CTACCGGCTG
CGCGCCCTGC CGCGGCCCCT GCGCCTGTCC TGGGACACGC TGCACAAGCA GTTCGGGGCC
GACAACGCCT CCCTGCGCAG CTTCCGCCAG GCCTTCAAGG CCGACGTCGC CCACCTGCGC
GAGGTGTTTC CGAAGCTGCC GATCAGCCTC GACGAGGCCG GCATGCAGCT CCTGCCCGCC
GATCCGAGCA CGCTCCTGGT GCCGCCCAAG CCCGCCCGGA AGAAGGCCGC CGGCTGA
 
Protein sequence
MGIEAKIEAI RDEDLRAELE AARGSFLFAV IVETIAHRQA QRDAEREAAA RAAEARAGMS 
RDQRRRDAVR AVIETEPVAP ENIQHIHSVL ALCGLPYRDP GETREFFREY GRNTLSILAG
RIKNPATGQM ELQGLPYGPK ARLVLLHLCT EAVRQRSPTI EVADSLSGFM REMGFAVTGG
ERGTIRQFKE QLNRLAACTL QIGLWDGQSR SSTLTMPPFR KLDLWRGEGQ AAAWSKTVQF
HQDFYENLVK HALPVDIRAA RAFAGSARKL DLLFWVGYRL RALPRPLRLS WDTLHKQFGA
DNASLRSFRQ AFKADVAHLR EVFPKLPISL DEAGMQLLPA DPSTLLVPPK PARKKAAG