Gene M446_5941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5941 
Symbol 
ID6132493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6531008 
End bp6532378 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content72% 
IMG OID641646043 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001772655 
Protein GI170744000 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.439532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.466453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACATCCTGAT CGTCGACGAC GAGGCCGACA TCCGCGACCT CGTGGCGGGC 
ATCCTCGACG ACGAGGGCCA CCGCACCCGC ACGGCCGGGT CCTCCGACGA GGCGCTCGCC
GCCATCGAGC AGCGCCGGCC CCACCTCGTC TTCCTCGACA TATGGCTGCA GGGCTCGCGC
CTCGACGGGC TCCAGCTCCT CGACGTGATC AAGGCCCAGG CCCCGGACCT GCCCGTGGTG
ATGATCTCGG GCCACGGCAA CATCGAGACC GCGGTCTCGG CCATCAAGGC GGGCGCCTAC
GACTTCATCG AGAAGCCGTT CAAGGCCGAC CGGCTGATCC TGGTGGCCGA GCGGGCGCTC
GAAGCCTCGC GCCTCAAGCG CGAGGTGCGC GACCTCAAGG CCCGCTCCGG CCAGGCGAGC
CGCATCGTCG GCGGCTCGGT GGCGGTGAAC CAGCTGCGCC AGACCATCGA GCGGGTCGCC
CCCACCAATG CCCGCGTGAT GATCTCGGGC GCGCCGGGCT CCGGCAAGGA GCTCTCGGCC
CGCACCCTCC ACGCGGCCTC GGGCCGGGCG AGCGGCCCCT TCGTGGTGAT CAACGCCGCC
ACGATCACGC CCGAGACCAT GGAGGCGGAG CTGTTCGGGG TCGAGGCCGC GGACGGGCGG
CCCCGCCGCG TCGGCGCCCT GGAGGAGGCC CACGGCGGCA CCCTCTACAT CGACGAGGTC
GCGGACATGC CCCGCGAGAC CCAGAACCGC ATCCTGCGGG TCCTCGTCGA CCAGAACTTC
CAGCGCGTCG GCGGCACCAC CCGGGTCCAT GTCGACGTGC GCATCATCTC CTCCTCCTCG
CGCGACCTCG CCGAGGAGAT CGCGGGCGGC CGCTTCCGGG AGGACCTCTT CCACCGCCTC
AGCGTGGTGC CGATCCGGGT GCCGCCGCTG GCCGAGCGCC GCGAGGACGT GCCGGAGCTG
ATCGGCTTCT TCATGGAGCA GATCTCGATG GCGACCGGCC TGCCCCAGCG CCGGATCGCC
CCCGACGCCA TGGCGGTGCT GCAATCCCAC GACTGGCCCG GCAACGTCCG CCAGCTGCGC
AACAACGTCG AGCGGCTGAT GATCCTCACC CAGGGCGATC CCGAGACCGA GGTCACCACC
GAGATGCTGC CGAGCGAGGT CGGCGCCCTC GTCCCCACCA CCCCGAGCGG GGCGGGGGGC
GAGAAGCTGA TGAGCCTCGC CCTGCGCGAG GCCCGCGAGA TCTTCGAGCG GGAGTACCTG
GTCGCCCAGA TCGCCCGCTT CTCCGGCAAC ATCTCCCGCA CCGCCGAGTT CATCGGCATG
GAGCGCTCCG CCCTGCACCG GAAGCTCAAG TCGCTCGGCA TCGGCGCGTG A
 
Protein sequence
MSADILIVDD EADIRDLVAG ILDDEGHRTR TAGSSDEALA AIEQRRPHLV FLDIWLQGSR 
LDGLQLLDVI KAQAPDLPVV MISGHGNIET AVSAIKAGAY DFIEKPFKAD RLILVAERAL
EASRLKREVR DLKARSGQAS RIVGGSVAVN QLRQTIERVA PTNARVMISG APGSGKELSA
RTLHAASGRA SGPFVVINAA TITPETMEAE LFGVEAADGR PRRVGALEEA HGGTLYIDEV
ADMPRETQNR ILRVLVDQNF QRVGGTTRVH VDVRIISSSS RDLAEEIAGG RFREDLFHRL
SVVPIRVPPL AERREDVPEL IGFFMEQISM ATGLPQRRIA PDAMAVLQSH DWPGNVRQLR
NNVERLMILT QGDPETEVTT EMLPSEVGAL VPTTPSGAGG EKLMSLALRE AREIFEREYL
VAQIARFSGN ISRTAEFIGM ERSALHRKLK SLGIGA