Gene M446_5929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5929 
Symbol 
ID6130195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6518580 
End bp6519683 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID641646032 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001772644 
Protein GI170743989 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCACCTGCGA CGCGATCATC AACGCGCTGC CGCTGCCGGT GCTCACCATC 
GGGCCGGACG AGCGCATCCT CCAGGTCAAC ATGGCCGCGG AGCACTTCTT CGACTATTCG
CGCCGGCTGA TGCAGCGCCA GCGCCTGCGC GACATCATCC CGTTCTCCTC GCCGATCATC
GCCCTGGTGA ACGAGGTGCG GCGGCGGCAC GCGAGTGTCA GCGAGTACCG GGTGGAGCTC
GGCTCGCCGC GCTCCGGCGT CGAGCGCAGC GTCGACGTGT TCGCGACCTA TCTCGACGAC
GAGATGGTGG TCCTGATGCT GCAGGAGCGC ACCATCGCGG ACAAGATGAA CCGCCAGCTC
ACCCATCGGC AGGCGGCCCG CTCGATGGTG GCGCTCGGCG CCATGCTGGC CCACGAGATC
AAGAACCCGC TCGCCGGCAT CCGGGGCGCC GCCCAGCTGC TGGAGCAGTC GGCGGGCGAG
GACGACCGCA TGCTGACGCG GCTGATCTGC GACGAGGCCG ACCGGATCGT GCGCCTCGTC
GAGCGCATGG AGCTGTTCGG GGACGAGCGC CCGGTCGAGC GCGGGCCGGT CAACGTCCAC
GGCGTCCTCG ACCAGGTGAA GCGCTCGGCC CAGTCCGGCT TCGCCCGCCA CATCCGCTTC
GTCGAGAATT ACGACCCCTC GCTGCCGCCG GTGCTCGGCA ACCGCGACCA GCTGGTCCAG
GTGATCCTCA ACCTCGTGAA GAATGCCGCC GAGGCGATCG GCGCGGACGC GGTCGACGGC
GAGATCACCC TCTCGACCGC CTTCCGCACG GGGTTGCGCC TGCAGGTGCC GGGCTCGCGC
GAGCGGGTGA GCCTGCCGAT CGAGGTCGCG GTGCGCGACA ACGGGCCGGG CGTGAGCGCC
GACCTGCTCC CCGACCTCTT CGACCCTTTC GTGACCACCA AGGCCCAGGG GTCGGGGCTC
GGCCTCGCCC TCGTCGCCAA GATCGTCGGG GACCACGGCG GCATCGTCGA GTGCGATCCC
GCCCCCCGCC GGACCACCTT CCGCGTACTC CTGCCGATGT CCCACGCCCG CGACGGGCGC
GAATCGGCCC CGGATGCCGA GTGA
 
Protein sequence
MSAPTCDAII NALPLPVLTI GPDERILQVN MAAEHFFDYS RRLMQRQRLR DIIPFSSPII 
ALVNEVRRRH ASVSEYRVEL GSPRSGVERS VDVFATYLDD EMVVLMLQER TIADKMNRQL
THRQAARSMV ALGAMLAHEI KNPLAGIRGA AQLLEQSAGE DDRMLTRLIC DEADRIVRLV
ERMELFGDER PVERGPVNVH GVLDQVKRSA QSGFARHIRF VENYDPSLPP VLGNRDQLVQ
VILNLVKNAA EAIGADAVDG EITLSTAFRT GLRLQVPGSR ERVSLPIEVA VRDNGPGVSA
DLLPDLFDPF VTTKAQGSGL GLALVAKIVG DHGGIVECDP APRRTTFRVL LPMSHARDGR
ESAPDAE