Gene M446_5843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5843 
Symbol 
ID6130089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6422830 
End bp6425256 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content70% 
IMG OID641645950 
Product1A family penicillin-binding protein 
Protein accessionYP_001772564 
Protein GI170743909 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.36925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.15552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTG TCCTTCGCTT CTTCGGCTTC CTGTTCAGCA TCGCCGCGAT GGTCTTCGTC 
GCCGGCGCCG CGGTAGGCGG CTACTTCTAC TGGAAGTACT CTCAGGACCT GCCCGACCAC
GCCGCGCTCG CCAATTACGA GCCGCCGGTG ATGACCCGCG TCCACGCGGC GGATGGCAGC
CTGCTGGCCG AGTATGCCCG CGAGCGGCGG CTCTACCTGC CGATCCAGGC GATGCCCAAG
ATCGTCGTGG CGGCCTTCCT GTCGGCCGAG GACAAGAACT TCTACAAGCA CAACGGCATC
GACCCCGAGG GCATCGTCCG CGCCGTGCTC ACCAACGCCC AGAGCGGCAA GAAGCAGGGC
GCCTCGACCA TCACCCAGCA GGTCGCCAAG AACTTCCTGC TCTCCAGCGA GCAGACGATC
GACCGCAAGG TCCGCGAGGC GCTGATCGCG CTGCGCATCG AGTCGACCTA TTCCAAGGAC
AAGATCCTCG AACTCTACCT GAACGAGATT TTCCTCGGCA CGATCGTGCC GGGCCGCAAC
CTGCACGGGA TCGCCGCCGC CGCCCTCGAT TATTTCGGCA AGTCGGTGCA CGAGCTGACG
ATCCACGAGG CGGCCTACCT GGCGGCGCTG CCCAAGGGGC CCAACAACTA CCACCCCTTC
CGCAAGACCC AGGCGGCGCT GGCCCGGCGC AACGAGATCA TCGGCCTCAT GGCCCAGAAC
GGGTACATCA CCCGCGAGGA GGCCGAGGCC GAGCGCAAGC AGCCCCTCGG GGTCAATCCG
CGCAGCATCT CGCCCAACAC CGCCAACGCG AACTACTTCG CCGAGGAGGT GCGCCGCGAG
ATCGCCGAGC GCTACGGCGA GAAGAAGCTC TACGAGGGCG GCCTGTCGGT GCGCACGACC
CTCGACCCGA AGATGCAGGC CCAGGCCCGC AAGGCCCTGG TGGACGGGCT CGTGCGCTAC
GACCAGGCCC GGGGCTGGCG CGGCCCGCAG GCCCGCCTCG ACCTCGCCGG GCGCGACTGG
GGCCAGGCGG TGGCGGAGGT GCAGGCGCTG GGCGACGTCC AGCCCTGGCG GCTCGCCGTC
GTCCTCGACA CGGCCGGCGG GCGGGCGCAG ATCGGCCTGC AGCCCAAGCG CGAGAGTTCG
GGCCAGGTCT CGAAGGACCG CGAGACCGGG ATCATCGGCC CGGAGGGCGT GCGCTGGACC
GGCCGCAGCG TGGCCGCGGC CCTGAGCCCC GGCGACGTCG TCTACGTCGA GCGCATGGAC
GGCGCCGGCA ACGCCTACCG GCTGCGGCAG GTGCCGGAGA TCTCGGGCGC CATCGTCGCC
ATGGACCCGC ATACGGGCCG CGTCCACGCC ATGGTGGGCG GCTTCTCCTT CGACGAGAGC
GAGTTCAACC GCGCCACCCA GGCCCAGCGC CAGCCGGGCT CCTCGTTCAA GCCGATCGTC
TACTCGGCGG CCCTGGACAA CGGCTACACG CCGTCCTCGA TCGTCCTCGA CACCCCGATC
ACCATCGAGG CCGGTCCGGG TCAGGAGGCC TGGACGCCCT CGAACTACGA CGGCAAGTCG
GGCGGCCCGC ACACCCTGCG CTACGGGATC GAGCACTCGA AGAACCTGAT GACGGTGCGG
CTCGCCAAGG ATATCGGCAT GCCGCTGATC GCCGAGTACG CCCGCCGCTT CGGCGTCTAC
GACGACCTGC TCCCGGTGCT GCCGATGTCG CTCGGCGCCG GCGAGACCAC GGTCATGCGC
ATGGTCACGG CCTACTCGAT GCTCGACAAT GGCGGCCGGC GCATCCGCCC GACCCTGATC
GACCGCATCC AGGACCGCAC CGGCGAGACG ATCTACCGCC ACGACAACCG CAAGTGCATC
GGCTGCGACG CCGAGAAGTG GTCCGGCCAG GACGAGCCGA AGCTCGTGGA CGAGTCCGAG
CAGGTGCTCG ACCCGCTCAC CGCCTACCAG ATGGTCTCGA TCATGGAGGG CGTGGTCCAG
CGCGGCACCG CCACGATCCT GAAGGACGTC GGCAAGCCGC TGGCGGGCAA GACCGGCACC
ACCAACGACG CCAAGGACGC GTGGTTCGTG GGCTTCTCGC CGGATCTCTG CGTCGGCATC
TATCTCGGCT ACGACAAGCC CCGCTCCCTC GGCGACCGCG CCACCGGCGG CGGGCTGGCG
GCGCCGATCG CCCGCGACTT CCTGAAGGCG GCGCTGGCCG ACAAGCCGCC GACTCCCTTC
CGGGTGCCCC CGGGCATCAA GCTGATCCGG GTCAACCTCG CCTCGGGCAC GCGCGCCTCG
GGCGGGGAGG GGAGCATCCT GGAAGCCTTC AAGCCCGGCA CCGCGCCGCC CGACAGCTAC
TCGGCCCCGG CGGCGGCCCA GCCCTCGGCC CCGGGCGCCC CGCCGCCGGA CGCGGACCGG
GCGGCCCAGG CGGGCGGCTT GTACTGA
 
Protein sequence
MRFVLRFFGF LFSIAAMVFV AGAAVGGYFY WKYSQDLPDH AALANYEPPV MTRVHAADGS 
LLAEYARERR LYLPIQAMPK IVVAAFLSAE DKNFYKHNGI DPEGIVRAVL TNAQSGKKQG
ASTITQQVAK NFLLSSEQTI DRKVREALIA LRIESTYSKD KILELYLNEI FLGTIVPGRN
LHGIAAAALD YFGKSVHELT IHEAAYLAAL PKGPNNYHPF RKTQAALARR NEIIGLMAQN
GYITREEAEA ERKQPLGVNP RSISPNTANA NYFAEEVRRE IAERYGEKKL YEGGLSVRTT
LDPKMQAQAR KALVDGLVRY DQARGWRGPQ ARLDLAGRDW GQAVAEVQAL GDVQPWRLAV
VLDTAGGRAQ IGLQPKRESS GQVSKDRETG IIGPEGVRWT GRSVAAALSP GDVVYVERMD
GAGNAYRLRQ VPEISGAIVA MDPHTGRVHA MVGGFSFDES EFNRATQAQR QPGSSFKPIV
YSAALDNGYT PSSIVLDTPI TIEAGPGQEA WTPSNYDGKS GGPHTLRYGI EHSKNLMTVR
LAKDIGMPLI AEYARRFGVY DDLLPVLPMS LGAGETTVMR MVTAYSMLDN GGRRIRPTLI
DRIQDRTGET IYRHDNRKCI GCDAEKWSGQ DEPKLVDESE QVLDPLTAYQ MVSIMEGVVQ
RGTATILKDV GKPLAGKTGT TNDAKDAWFV GFSPDLCVGI YLGYDKPRSL GDRATGGGLA
APIARDFLKA ALADKPPTPF RVPPGIKLIR VNLASGTRAS GGEGSILEAF KPGTAPPDSY
SAPAAAQPSA PGAPPPDADR AAQAGGLY