Gene M446_5812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5812 
Symbol 
ID6131001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6387780 
End bp6389684 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content76% 
IMG OID641645919 
Productchloride channel core 
Protein accessionYP_001772533 
Protein GI170743878 
COG category[K] Transcription
[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00468888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCAGC AGAGGGCTCC GGCCCAGGCC GCCGGCAGGC CGGCCCAAGC CGCCGGCAGG 
CCGGCCCAGT CCGCCGGGAG GCCGGCCCAA GCCGACGGCA GGCCGGCCCA GTCCGCCGGG
CGGCACGCCA TACCCGTCCG GGCCCGGCGT CCGCTCGCGG ATTTCAGCGC CGACCATCGG
GTCGTGATCC TGCTCGCCAT GGCGCTCGTG GTGGGGACGG GCGGGGCCTT CGCGGCCCTG
GCGCTGGTCA AGCTGATCGG CCTCGTCACG AACCTCGCGT GGTTCGGGCG CCTCGACGCG
GAGCCCGCCG GCCTCGCGGG CGCGCCCCGC GGCGCCTGGA TGGTGCTGGC GCCGGCGCTG
GGCGGCCTCG TGATCGGGCT GATGGCCCGG TTCGGCTCGG AGAAGATCCG CGGCCACGGC
ATCCCGGAGG CGATCGAGGC GATCCTGATC GGCGGCAGCC GGATGTCCGC CAAGGTGGCG
CTGCTGAAGC CGCTCTCCTC GGCCATCTCG ATCGGCACCG GCGGCCCCTT CGGCGCCGAG
GGACCGATCA TCATGACGGG CGGGGCGATC GGCTCGCTCT TCGCGCAGCT GTTCCACCTG
AGCGCGGCCG AGCGCAAGAC GCTGCTCGTC TCCGGCGCCG CCGCCGGCAT GACGGCGATC
TTCGGCACGC CGGTCGCCGC CCTGCTCCTC GCGGTGGAGC TGCTGCTGTT CGAGTGGCGC
CCGCGCAGCT TCATCCCGGT CGCGGCGGCC GCCGCGGTGG CGACCGGCTG GCGGCCCCTG
CTGTTCGGCG CGGGGCCGCT CTTCCCCTTC GCGGCGGTGC CGGACCTGCC CGGCTGGGGG
CTGCTCTCCT GCGCCGGGCT CGGGGTCGCG GCGGGCCTGC TCTCCGGCCT GCTCACCAAG
CTGCTCTACG GCCTGGAGGA CGCCTTCGAG CGCCTGCCGG TCCACTGGAT GTGGTGGCCG
GCCCTCGGGG GCCTCGTCGT CGGGGCGGGC GGCCTCGTCG AGCCCCGCGC CCTCGGAATC
GGCTACGACG TCATCGCCGA CCTGCTCGGC GGCCGCCCGG GGGCGGGGGC CGTCCTCACC
CTCCTCGCCG TCAAGGCGCT GATCTGGCTC GTCGCCCTGT CCTCGGGGAC CTCCGGCGGC
GTGCTCGCCC CGCTCCTGAT CCTCGGCGGG GCGATGGGCT GGCTCCTCGG CCACGCCGCC
GGCCTGCCGG GGGAGGCGGG ATTCTGGGCG CTCCTCGGCA TGGCGGCGAT GCTGGGCGGC
ACCATGCGGG CCCCGCTCAC GGGGGCGCTC TTCGCCGTGG AACTGACCGG CGAGGTGCGC
GCCCTCGCGC CGCTGCTCGC CGCCACGGTG GCGGCCTACG CGGTGACGGT GCTGCTGCTG
AAGCGCTCGA TCCTCACCGA GAAGATCGCG CGGCGCGGGC AGCACGTCAC CCGCGAGTAC
GGCGTCGATC CCTACGAACT GACCCGCGTC GCCGAGGTGA TGGTGCGCGA GGTGGACGTG
CTGCCGGCGG ACCTGCCGGT GGCCGAGGCG CTGGCGGCGA TCGAGGCGGG GCGCCACCGG
GCCTACCCGG TCGTCGACGC CGCCCGGCGC CCGGTCGGGC TCGTGACCCG CGCCGATGCC
CTGCGCTGGG CGGTGGAGGA GGGGCGGGGC GCAGCGCATC CGGGGGAACG CCTGGAGGAG
CGGGTCTCCG ACGCCTCCCT GGCGGTGGTG CATCCGCGGG ACGTGGTGGC GCGGGCCATC
GACGTCATGA TGGAGAGCGA CCAGGGCCGC ATCCCGGTGA CCGATCCGCG GACGGGCGCC
CTCGTCGGCC TCGTCTCCCG CAAGGACCTG CTGCGCGTGC GCGCCGCGGT GATCCGCGCC
GAGGCCGAGC GGCGCCCCTA CCTCGTGCGC GGGCGCGGCG GCTGA
 
Protein sequence
MDQQRAPAQA AGRPAQAAGR PAQSAGRPAQ ADGRPAQSAG RHAIPVRARR PLADFSADHR 
VVILLAMALV VGTGGAFAAL ALVKLIGLVT NLAWFGRLDA EPAGLAGAPR GAWMVLAPAL
GGLVIGLMAR FGSEKIRGHG IPEAIEAILI GGSRMSAKVA LLKPLSSAIS IGTGGPFGAE
GPIIMTGGAI GSLFAQLFHL SAAERKTLLV SGAAAGMTAI FGTPVAALLL AVELLLFEWR
PRSFIPVAAA AAVATGWRPL LFGAGPLFPF AAVPDLPGWG LLSCAGLGVA AGLLSGLLTK
LLYGLEDAFE RLPVHWMWWP ALGGLVVGAG GLVEPRALGI GYDVIADLLG GRPGAGAVLT
LLAVKALIWL VALSSGTSGG VLAPLLILGG AMGWLLGHAA GLPGEAGFWA LLGMAAMLGG
TMRAPLTGAL FAVELTGEVR ALAPLLAATV AAYAVTVLLL KRSILTEKIA RRGQHVTREY
GVDPYELTRV AEVMVREVDV LPADLPVAEA LAAIEAGRHR AYPVVDAARR PVGLVTRADA
LRWAVEEGRG AAHPGERLEE RVSDASLAVV HPRDVVARAI DVMMESDQGR IPVTDPRTGA
LVGLVSRKDL LRVRAAVIRA EAERRPYLVR GRGG