Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5528 |
Symbol | |
ID | 6129948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 6064281 |
End bp | 6065012 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641645661 |
Product | HAD family hydrolase |
Protein accession | YP_001772276 |
Protein GI | 170743621 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTC CTTCCCTCGA CAGCTTCAAG GTTCTCACCT TCGACGTCGT CGGTACCCTG ATCGACTTCG AGAAGGGGAT CCTGGACCAC CTGCGCGCGG TGTCCGGGCG CAGCCGTGAG GAACTCAGCG ACGCCCGCAT CTTCGAGGTT TACCTGCGAG GCCGCGAGTT GCACCACGAG CGGTCGAGCG AGGTCTTCGT CGACGTCTAC CACCACGTCG CCAAGGAACT GGGATTTCCC GACAGCGACG CGGCCGCCGA CGCGTTCCAG CTCTCGGTGC TGCGCTGGCC GGCCTTCTCC GACTCTGCCG CAGCCCTCAG GCGCCTGCGC GGCCATTATC GACTCGTCGC GATGACGAAT GCCGACCGCG CCGCGTTCTC GTTCTACTCC CACACGCTCG GAACCCCCTT CCACGACAGC GTCACCTACG ACGAGACGGG CGTCGCCAAG CCCGATCCAC AATTCTTCGC CTTCAACCGC GGCCGGCAAT CCGCCTTCGG CTTCACGCAG AGCGAGATAT TGCACGTGGC CCAGAGCCAG CATCACGACA TCGGCGTCGC CCGCGATCTC GGCTACACGG TGTGCTGGAT CGAGCGGCGC CAGGGGCTCG AGGGCTTCGG CGGCACGCCG AAGCCGGCCA GGGTGACCAC TCCCGATTTT CATTTTCCGA CTTTGGAGAA GCTCGCCGAC GCCGCCGACG CGGCCTTCGC GGCGGCCGTG ACGGGGCGGT AG
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Protein sequence | MPTPSLDSFK VLTFDVVGTL IDFEKGILDH LRAVSGRSRE ELSDARIFEV YLRGRELHHE RSSEVFVDVY HHVAKELGFP DSDAAADAFQ LSVLRWPAFS DSAAALRRLR GHYRLVAMTN ADRAAFSFYS HTLGTPFHDS VTYDETGVAK PDPQFFAFNR GRQSAFGFTQ SEILHVAQSQ HHDIGVARDL GYTVCWIERR QGLEGFGGTP KPARVTTPDF HFPTLEKLAD AADAAFAAAV TGR
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