Gene M446_5528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5528 
Symbol 
ID6129948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6064281 
End bp6065012 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID641645661 
ProductHAD family hydrolase 
Protein accessionYP_001772276 
Protein GI170743621 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTC CTTCCCTCGA CAGCTTCAAG GTTCTCACCT TCGACGTCGT CGGTACCCTG 
ATCGACTTCG AGAAGGGGAT CCTGGACCAC CTGCGCGCGG TGTCCGGGCG CAGCCGTGAG
GAACTCAGCG ACGCCCGCAT CTTCGAGGTT TACCTGCGAG GCCGCGAGTT GCACCACGAG
CGGTCGAGCG AGGTCTTCGT CGACGTCTAC CACCACGTCG CCAAGGAACT GGGATTTCCC
GACAGCGACG CGGCCGCCGA CGCGTTCCAG CTCTCGGTGC TGCGCTGGCC GGCCTTCTCC
GACTCTGCCG CAGCCCTCAG GCGCCTGCGC GGCCATTATC GACTCGTCGC GATGACGAAT
GCCGACCGCG CCGCGTTCTC GTTCTACTCC CACACGCTCG GAACCCCCTT CCACGACAGC
GTCACCTACG ACGAGACGGG CGTCGCCAAG CCCGATCCAC AATTCTTCGC CTTCAACCGC
GGCCGGCAAT CCGCCTTCGG CTTCACGCAG AGCGAGATAT TGCACGTGGC CCAGAGCCAG
CATCACGACA TCGGCGTCGC CCGCGATCTC GGCTACACGG TGTGCTGGAT CGAGCGGCGC
CAGGGGCTCG AGGGCTTCGG CGGCACGCCG AAGCCGGCCA GGGTGACCAC TCCCGATTTT
CATTTTCCGA CTTTGGAGAA GCTCGCCGAC GCCGCCGACG CGGCCTTCGC GGCGGCCGTG
ACGGGGCGGT AG
 
Protein sequence
MPTPSLDSFK VLTFDVVGTL IDFEKGILDH LRAVSGRSRE ELSDARIFEV YLRGRELHHE 
RSSEVFVDVY HHVAKELGFP DSDAAADAFQ LSVLRWPAFS DSAAALRRLR GHYRLVAMTN
ADRAAFSFYS HTLGTPFHDS VTYDETGVAK PDPQFFAFNR GRQSAFGFTQ SEILHVAQSQ
HHDIGVARDL GYTVCWIERR QGLEGFGGTP KPARVTTPDF HFPTLEKLAD AADAAFAAAV
TGR