Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5516 |
Symbol | |
ID | 6131178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6048867 |
End bp | 6050003 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641645649 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001772265 |
Protein GI | 170743610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.575246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.110297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACA GCTTCCGCTT CACCGTCGCG GCGACCGACG GCGCCGCCCG CACCGGCGAG ATCCGCATGC CGCGCGGCGT CATCCGCACC CCGGCCTTCA TGCCGGTGGG CACGGCCGGC ACCGTCAAGG CGATGTATCC CGAGCAGGTG AAGGCGCTCG GCGCCGACGT CGTGCTCGGC AACACCTACC ACCTGATGCT GCGCCCCGGC GCCGAGCGGG TGGCGCGGCT CGGCGGGCTC CACGCCTTCA TGCAGTGGCC CTACCCGATC CTCACCGATT CCGGCGGCTT CCAGGTCATG TCCCTGTCGG GCCTGCGCAG GCTCGACGAG ACCGGGGTGA CGTTCCAGTC GCATCTCGAC GGCAGCGCCC ACGTGCTGAC CCCCGAGCGC TCGATCGCGA TCCAGGGCCT GCTCGGCTCC GACATCCAGA TGCAGCTCGA CGAGTGCGTG CGGCTCCCGG CCGAGCCGGC GGCGATCGAG CGCGCCATGC GCCTGTCGCT GCGCTGGGCC GAGCGCTGCC GCATCGCCTT CGGCGAGCAG CCGGGGCGGG CCCTGTTCGG CATCGTGCAG GGCGGGGACG TCCCGGCCCT GCGCGTCGAG AGCGCGCGGG CCCTGGTCGG CCTCGACCTC AAGGGCTACG CCATCGGGGG CCTGGCGGTG GGGGAGCCGC AGAGCACCAT GCTGGCGATG ATCGAGGCGG TGGAGCCCCA CCTGCCGGCG GCCAAGCCCC GCTACCTGAT GGGGGTGGGC ACGCCCGACG ACATCGTGGA GGCGGTGCGC CGCGGGATCG ACATGTTCGA CTGCGTGATG CCGACCCGCG CCGGCCGGCA CGGCATGGTC TACACCCGGC ACGGCCGCAT GAACCTGCGC AACGCCCGCT TCGCCGAGGA CGCCGCGCCC CTCGACCCGG ATTCCGCCTG CCCGGCCGCC CACCTCTACA GCAAGGCCTA TCTCCACCAC CTCGTGCGGG CGGGCGAGAT CCTCGGCATG ATGCTGCTCA CCTGGAACAA CCTGTCCTAC TACCAGGACC TGATGGCGGG CCTGCGCCGG GCCATCGCGG CAGGGCGGCT CGACGATTTC GTCGGCGAGA CCCGCGAGGG CTGGGCGCGC GCCGAGCGCG ACCGGGCGGG CGGCTGA
|
Protein sequence | MTDSFRFTVA ATDGAARTGE IRMPRGVIRT PAFMPVGTAG TVKAMYPEQV KALGADVVLG NTYHLMLRPG AERVARLGGL HAFMQWPYPI LTDSGGFQVM SLSGLRRLDE TGVTFQSHLD GSAHVLTPER SIAIQGLLGS DIQMQLDECV RLPAEPAAIE RAMRLSLRWA ERCRIAFGEQ PGRALFGIVQ GGDVPALRVE SARALVGLDL KGYAIGGLAV GEPQSTMLAM IEAVEPHLPA AKPRYLMGVG TPDDIVEAVR RGIDMFDCVM PTRAGRHGMV YTRHGRMNLR NARFAEDAAP LDPDSACPAA HLYSKAYLHH LVRAGEILGM MLLTWNNLSY YQDLMAGLRR AIAAGRLDDF VGETREGWAR AERDRAGG
|
| |