Gene M446_5431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5431 
Symbol 
ID6130797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5964401 
End bp5965519 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID641645565 
Productextracellular ligand-binding receptor 
Protein accessionYP_001772181 
Protein GI170743526 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.836307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.601412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGC CCGGCCTCGT TGTGGCCGCC GGTCTCGCCT TCGCGGGCTC GGCCCAGGCG 
CAGATCAAGA TCGCGGTCGC GGGTCCCATC ACGGGCGCCA ACGCGGCCTT CGGGGCCCAG
CTCAAGAACG GCGCCGTCCA GGCCGTGGAG GACATCAACA AGGCGGGCGG CATCCTGGGC
CAGAAGATCG TGCTGGTCGA CGGCGACGAC GCCTCCGATC CCAAGCAGGG CGTCTCGGTC
GCCAACAAGT TCGCCGCCGA GGGCGTGAAG GCGGTCGTGG GCCACTTCAA CTCCGGCGTC
TCGATCCCGG CCTCGGAGGT CTACGCGGAA TCCGGCATCG TCCAGATCAC CCCGGCCTCG
ACCAACCCGA AATTCACCGA TCGCAAGCTC TGGAACACGT TCCGGACCTG CGGCCGCGAC
GACCAGCAGG GCGCGGTGGC GGGCGCCTAC CTGGCCAGCC ACTTCAAGGG CAAGAACGTC
GCCTTCGTGC ACGACAAGAC GCCCTACGGC CGCGGGCTCG CCGACGAGAC CCTCAAGGCC
CTCAAGGCCA AGGGCGGCAA GGACGTGCTG TTCGAGGGCA TCAACCCGGG CGAGAAGGAC
TACTCGGCCC TGGTGTCGAA GTTGAAGCAG GCCAAGACCG ACGTGGTCTA TTTCGGCGGC
CTGCATCCCG AGGCCGGCCT GATCGTGCGC CAGATGCACG ACCAAGGCCT CAACGTCCCG
CTGATGAGCG GTGACGGCAT CACCGACAAG GAATTCGCCC AGATCGCCGG GCCCGGCGCG
GACGGCACCC TGATGACCTT CTCGCCCGAC GCGCGCAAGA ACCCCAACGC CAAGGACGTG
GTCGCGGCCT TCAAGGCCAA GAACATCGAT CCGGAGGCCT ACACCCTCTA CTCCTACGCC
GCCTTCCAGA TCCTGAAGGC CGCCATGGAG GAGGCGAAGT CGACCGACAG CAAGAAGGTC
GCCGAGATCA TGCATTCCGG CAAGCCGTTC AAGACCGTGA TCGGCGACAT CGCCTACGAC
AAGAAGGGCG ACATCACCCG TCCCGACTAC GTCATGTACG TCTGGAAGAA GGCCGCCGAC
GGCCGGATCG ACTACACCGG CAACGAGCTG ACCCAGTAA
 
Protein sequence
MLLPGLVVAA GLAFAGSAQA QIKIAVAGPI TGANAAFGAQ LKNGAVQAVE DINKAGGILG 
QKIVLVDGDD ASDPKQGVSV ANKFAAEGVK AVVGHFNSGV SIPASEVYAE SGIVQITPAS
TNPKFTDRKL WNTFRTCGRD DQQGAVAGAY LASHFKGKNV AFVHDKTPYG RGLADETLKA
LKAKGGKDVL FEGINPGEKD YSALVSKLKQ AKTDVVYFGG LHPEAGLIVR QMHDQGLNVP
LMSGDGITDK EFAQIAGPGA DGTLMTFSPD ARKNPNAKDV VAAFKAKNID PEAYTLYSYA
AFQILKAAME EAKSTDSKKV AEIMHSGKPF KTVIGDIAYD KKGDITRPDY VMYVWKKAAD
GRIDYTGNEL TQ