Gene M446_5358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5358 
Symbol 
ID6130664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5886198 
End bp5888873 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content77% 
IMG OID641645488 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001772110 
Protein GI170743455 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.102832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCG CCACGCCCCT GGCGACCCGC CTCGGCCGGG CGGTGATCGG CGCCGTGCTG 
GTCGCCCTGG CGGTGAGCAC CGCGCTCGGC GTCTGGCGCG AGGCGACGCG CTACGTCGCC
GACAAGCGCG ACTCGCTGCA CGGCATCGCC AGCGTCTTCG CGAGCGCCAC CGCGCGCGCC
GCCGCCGAGA TGGATGCGGC GGGGGCCCAC GCCACCCTGC GGGCCATCGC GGACGAGAAG
GGCGTCGTCT ACGCGGCGCT CTCGCTGCCG GGCGGCGCCA CCCTGGCCGA GCAGGGAACG
GGCCTGCGCC TCGCGCGCGA CCTCGACCTC GACCGCGAGC AGGGCGTCTC GCCCTTCGAC
CTCCTGTGGA CGCGCACCGT CCGCCTGAGC GTGCCGGTGC GGGAGAACAC CGTGGTGGTC
GGGCGCGTCA CCCTGATCGC CGAGACGGCC GACCTGGTCG AGCGCCTCTA CGAGGTGCTC
GCCAACGCCG CCATGACGGC GGGCCTCGCG GTCCTGGTCG GGCTCGCGGT GGCGTGGCGC
CTGCAGGCGG CCCTGACCCG GCCCCTCGCC ACCCTCTCCC ACGCCATGAC GACCGTGCGC
GAGAACCACG ACTACGCCCA CCGCGTCACC GTGGTGGCGG AGGACGAGGT CGGCGCCCTC
GCGCGGACCT TCAACGGCCT CCTCGACGCG GTCGACGAGC GCGACCGCCG GCTCGCCGCC
CACCGCGCCC GCCTGGAGCA GGAGGTGAGC GACCGCACCG CCGACCTGAG CGAGGCCAAG
GAGGCGGCCG AGGCCGCCAA CGCGGCGAAA TCCAGCTTCC TCGCCACAAT GAGCCACGAG
ATCCGCACGC CCATGAACGG CATGCTGGTC ATGGCCGAAC TCCTCGCCTC GGGCGACCTG
CCGGCGCGCC AGCGCCGCTA CGCCGAGGTG ATCGCCCGCT CGGGGCAGAA CCTGCTCGCC
ATCATCAACG ACATCCTCGA CTTCGCGAAG GTCGAGGCGG GCAAGCTCGA CCTCGAGCGG
ATCCCGGTCG ACCCGGCCGA GGTGGCCGAC ACGGTGGTGA CCCTGTTCGG CGAGCGGGCG
CGGGGCAAGG GGCTCGACCT CGCGGCGCTG GTCGCCCCCG ACGTGCCGCG GGCGATCGCC
GGCGACCCTG TCCGGCTCGG CCAGGTGCTC GGCAACTTCG TCAACAACGC GCTGAAATTC
ACGGAGGCGG GCCACGTCCT CATCCGCCTG GAGATGCGGG AGGGCGGTGC CCGCCTGCGC
CTCTCGGTGA CCGATACGGG GATCGGCATC CCGGCCGAGG CGCTCGGCTC CCTGTTCACC
GCCTTCTCCC AGGCCGACCA ATCGACCACC CGCCGCTTCG GCGGCACCGG CCTCGGCCTC
TCCATCGCCG AGCGGCTGGC CGCCGCGATG GGCGGGCGGG TCGGCGTCGA GAGCCGGGTC
GGCGAGGGCT CGACCTTCTT CGCCGAGATC CCGGTCGAGG TGCTGGAGCC GGCCCGGCCG
GTCCGGCGCG ATCCCGCGGT GCTGCCGCGG GTGATGGTCG CGGCGCGGGG GGACGCCACC
CGGGCGGCGC TGCTCTCGGG CCTCTCGGCG GCGGGCTTCG TCCCGGCGGA CGAAGGGCCG
GCCCACGCGA TCCTGGACGC GGCCGAGCTC GCGGCGCGGG GACGCCCGCC GGGCGCCGGG
CGGGTGCTGG CGCTCGCCCC GATGGGCGAT GCGCGCGGCG CCGAGGTGCT GGCCGCCGGC
CTCGCCGACG AGGTGCTGCG CTGGCCCCTG GCGCAGGCCG AGTGGCGCCA AGCCCTCGCG
GACCTGGCGC GGGGCACGGC CCTCGCGGCC GCGGCGGAGC GCCGCGAGGC GGCGGCCGCG
TCCCCCGCCC GCTTCCCGCG GGCGCGGGTG CTGGTGGCGG ATGACAGCCC CGTCAACCGG
GAGGTCGCGG TCGAGGCCCT CGCCCGCTGC GGCGTGACGC AGGTCGTGAC CGTGGAGAAC
GGGCGGGAGG CGGTGGAGGC GGCGGCCGGC GGCGGCTTCG ACCTCGTCCT GATGGACGGC
AGCATGCCGA TCCTCGACGG GTTCGACGCG GCGCGGGCGA TCCGCGCCCG CGAGGCCGCG
ACCGGCGGGA CGCGGCTGCC GATCGTGGCG CTCACCGCGC ACGTGATCGG CGAGGGCGCC
GAGGCGTGGC GGGAGGCGGG CATGGACGGC ATGCTCGCCA AGCCCTTCAC GCTCGCGGAT
CTCGCGCGCC TTCTCGGCAG CCTGCTCCGG GAGGACGGCC CGCCCGCCGC GGCGCCGGAG
CCGGCATCGG CCGGGGCGCC GGGCGATGGC GCCGCTCCCC AGGCCCTGCT CGATCCCGGC
ACGCTGGCGG GGCTCGACGA GATGGCGCAG GCGAGCGGCC CGGCCTTCAT CGCCCGGCTG
CTCGGCCTGT TCCGCGAGCA CGCCCCGAAG GGCCTCGCCG CCCTGCGCGA GGCCGCGGAC
GCTCCCGCGG CCGCCCGGGC CGCGCACGGC CTCAAATCAA TGAGCCTCAA TGTCGGCGCC
TCCGCCCTCG CTGCGCGCCT CGCCGAGATC GAGCGGGCGG CCCGGGGGGA GGATCGGATG
CCGGAGGCCG CGATGCTCGA CGGCCTCGAC CCGCTCCTCG CCGGCACGCT CGCGGCGCTC
GACGGGCATT TCCGCGCGCT GCCGCGAGCG GCGTAG
 
Protein sequence
MRRATPLATR LGRAVIGAVL VALAVSTALG VWREATRYVA DKRDSLHGIA SVFASATARA 
AAEMDAAGAH ATLRAIADEK GVVYAALSLP GGATLAEQGT GLRLARDLDL DREQGVSPFD
LLWTRTVRLS VPVRENTVVV GRVTLIAETA DLVERLYEVL ANAAMTAGLA VLVGLAVAWR
LQAALTRPLA TLSHAMTTVR ENHDYAHRVT VVAEDEVGAL ARTFNGLLDA VDERDRRLAA
HRARLEQEVS DRTADLSEAK EAAEAANAAK SSFLATMSHE IRTPMNGMLV MAELLASGDL
PARQRRYAEV IARSGQNLLA IINDILDFAK VEAGKLDLER IPVDPAEVAD TVVTLFGERA
RGKGLDLAAL VAPDVPRAIA GDPVRLGQVL GNFVNNALKF TEAGHVLIRL EMREGGARLR
LSVTDTGIGI PAEALGSLFT AFSQADQSTT RRFGGTGLGL SIAERLAAAM GGRVGVESRV
GEGSTFFAEI PVEVLEPARP VRRDPAVLPR VMVAARGDAT RAALLSGLSA AGFVPADEGP
AHAILDAAEL AARGRPPGAG RVLALAPMGD ARGAEVLAAG LADEVLRWPL AQAEWRQALA
DLARGTALAA AAERREAAAA SPARFPRARV LVADDSPVNR EVAVEALARC GVTQVVTVEN
GREAVEAAAG GGFDLVLMDG SMPILDGFDA ARAIRAREAA TGGTRLPIVA LTAHVIGEGA
EAWREAGMDG MLAKPFTLAD LARLLGSLLR EDGPPAAAPE PASAGAPGDG AAPQALLDPG
TLAGLDEMAQ ASGPAFIARL LGLFREHAPK GLAALREAAD APAAARAAHG LKSMSLNVGA
SALAARLAEI ERAARGEDRM PEAAMLDGLD PLLAGTLAAL DGHFRALPRA A