| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5346 |
|---|
| Symbol | |
|---|
| ID | 6134681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5874248 |
|---|
| End bp | 5875858 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641645476 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001772098 |
|---|
| Protein GI | 170743443 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.173896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0532745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCCGC TCCTCAGCCT CCGGGGCCTG TCGGTGGCCT ACGGCGAGGG GGCGGCCCTG
TCGGGCCTCG ACCTGACCCT CGGGCGGGGG GAGACGCTCG CCCTCGTGGG CGAATCCGGC
TCGGGCAAGA GCCAGGCGGC GCTCGCCGTG ATGGGATTGC TGCCGGAGAC GGCGCGGGTG
ACGGGCTCGG CCCTGTTCGA CGGCACCGAG CTGATCGGCC TCCCCCGCCC GGATCTCGAC
CGCATCCGCG GCGCGCGGAT CGGCATGGTG TTCCAGGAAC CGATGAGCGC CCTGCCGCCG
CTCTCCCCCG TCGGGCACCA GATCGCCCTG CCGCTGCGGG CGCATCGCGG GCTGACGCGC
GCCCAGGCCC GCGCCCGCGC CCTCGACCTC CTGCGCCTCG TGGGGCTGCG CGACGCCGCC
GCGCGGCTCG GCGCCTACCC GCACGAATTG TCGGGGGGCG AGCGCCAGCG GGTGATGATC
GCCATGGCGC TCGCCTGCGA GCCCGACCTG CTGATCGCGG ACGAGCCGAC CACGGCGCTC
GACGTCACCG TCCAGGCCCA GATCCTGGCG CTGCTGGCCG ACCTCAAGGC CCGGCTCGGC
CTCGCGCTCC TGTTCATCAG CCACGACCTG CGCCTGGTGC GGCGCATGGC CGAGCGCACC
GCGGTGCTGC GGGGCGGGCG CCTCGTCGAG TGCGGGCCGA CGGAGCGGCT CTTCGCCGAG
CCGCGTGCGC CGGAGACCCG CGACCTCGTG GCGGCCGAGC CCGCCGGGCG CAAGGGCCCG
GTCCCGGCCT CCTCCCCTCT GGTGCTGGAG GCGCGCGGGC TCCGCGTCGC CTATCCGGGG
CGGGGCGGGC TGCTGCGGCG GGCGCCGCCG CGGGTGGCGC TCGCCGGCCT CGACCTCGCG
CTCAGGGCCG GGCAGACCCT CGGGGTGGTC GGGGAATCGG GCTCGGGCAA GTCGAGCCTC
GGGCGGGCGC TGCTGCGGCT GGAGCCGGCC GCGACCGGGA TCGTGCGCTT CGAGGACCGG
GACCTGACCG GGCTCGGCCG GGCGCAGCTG CGGCCGCTGC GGCGGGGTTT CCAGCCGGTG
TTCCAGGACC CGCACGGCTC GCTCTCGCCG CGGCTCACCG CGGGGGAGAT CGTGTCCGAG
GGCCTGCGGG TCCACGCGCC GCGCCTGAGC GCCCGCGAGC GCGACGCGCG GGCCGCGGAG
GCCTTCGCCG CGGTGCGGCT CGATCCGGAC TGGCGCCACC GCTTCCCGCA CGCCTTCTCG
GGCGGGCAGC GGCAGCGCAT CGCCATCGCG CGGGCGATGA TCCTGCGGCC GCGCGTGGTG
GTGCTCGACG AGCCGACCTC GGCGCTGGAC CGCACGGTGC AGCGGGACAT CGTCGCGCTG
CTGCGCGAGT TGCAGGCGGC GCACGGCCTC GCCTACCTGT TCATCAGCCA CGACCTCGCG
GTGGTGCGCG CGCTCGCCGA CACTTTGCTG GTCCTGCGCG ACGGGCGCGA GGTCGAGCGG
GGCGAGACCC TGGAGGTGCT GGCGCGCCCG CGGCAGGCCT ACACCCGGGC GCTGGTCGCG
GCGGCGGGGC TCGGGGAGCC CGCCCCGGCC TCCGGGCCGG ATGGTTCCTA G
|
|---|
| Protein sequence | MAPLLSLRGL SVAYGEGAAL SGLDLTLGRG ETLALVGESG SGKSQAALAV MGLLPETARV
TGSALFDGTE LIGLPRPDLD RIRGARIGMV FQEPMSALPP LSPVGHQIAL PLRAHRGLTR
AQARARALDL LRLVGLRDAA ARLGAYPHEL SGGERQRVMI AMALACEPDL LIADEPTTAL
DVTVQAQILA LLADLKARLG LALLFISHDL RLVRRMAERT AVLRGGRLVE CGPTERLFAE
PRAPETRDLV AAEPAGRKGP VPASSPLVLE ARGLRVAYPG RGGLLRRAPP RVALAGLDLA
LRAGQTLGVV GESGSGKSSL GRALLRLEPA ATGIVRFEDR DLTGLGRAQL RPLRRGFQPV
FQDPHGSLSP RLTAGEIVSE GLRVHAPRLS ARERDARAAE AFAAVRLDPD WRHRFPHAFS
GGQRQRIAIA RAMILRPRVV VLDEPTSALD RTVQRDIVAL LRELQAAHGL AYLFISHDLA
VVRALADTLL VLRDGREVER GETLEVLARP RQAYTRALVA AAGLGEPAPA SGPDGS
|
|---|
| |