Gene M446_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5300 
Symbol 
ID6130699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5818019 
End bp5818471 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content73% 
IMG OID641645432 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001772055 
Protein GI170743400 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.534129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0151148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCA ACAAGGGAAA GTACGGGCTC AAGGCGCTCG TCCACCTCGC GGCCCTGCCG 
CCGGGGACCC GCATCGGCGT CGCCGAGGTC GCGGCGGCGA ACAACATCCC GAAGAAGTTC
CTCGACGCGA TCCTGGGCGA GCTGCGCAAT GCCGGCCTCG TGCACAGCCG CAAGGGGCCC
GGCGGCGGCT ACGCCCTGGC GCGGCCGCCG GAGGAGATCC GGGTCGGCCA CGCGGTGCGC
GTGCTCGACG GGCCGCTCGC CCCCGTTCCC TGCGCCAGCC GCACGGCCTA CCGCCCCTGC
GAGGATTGTC CCGACGAGGG GGCCTGCGCG GTGCGCCTCG TGATGCTGGA GGTGCGCAAC
AGCATCGCGG GGGTGCTCGA CACGCTCACG CTCGCGCAGA TGCGCGACCT GCCGGCGGCG
GACGAGGGCG GTAGCATCAC CTACCAGATC TGA
 
Protein sequence
MLTNKGKYGL KALVHLAALP PGTRIGVAEV AAANNIPKKF LDAILGELRN AGLVHSRKGP 
GGGYALARPP EEIRVGHAVR VLDGPLAPVP CASRTAYRPC EDCPDEGACA VRLVMLEVRN
SIAGVLDTLT LAQMRDLPAA DEGGSITYQI