Gene M446_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5275 
Symbol 
ID6129317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp5792087 
End bp5792701 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID641645410 
Product3'-5' exonuclease 
Protein accessionYP_001772033 
Protein GI170743378 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.28449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0567423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC GCCTGCACCG CGGCGACCTG CCCGACGATT ACGCTCCGGG CCCGGCCATC 
GCGGTCGACA CCGAGACCCT CGGCCTCGAG CCCCACCGGG ACCGCCTCTG CGTGGTCCAG 
ATCTCCCGCG GCGACGGCGA GGCCGACCTC GTCCAGATCG CCAAGGGCGG GCCCGAACCC 
GTGGTGCTCA AGCGCGTCCT GACCGATCCC GCGGTCACCA AGATCTTCCA CTTCGCCCGC 
TTCGACCTCG CGGTGCTCTT CCACCGGCTC GGCGTGATGC CGGGGCCGAT CTACTGCACC 
AAGGTCGCCT CGCGGCTCTC CCGCACCTAC ACCGACCGGC ACGGGCTCAA GGACCTCGTG 
CGGGAGTTGC TCGGAATCGA GATCTCCAAG CAGCAGCAAT CGTCCGATTG GGGCGCCGAG 
ACGCTGAGCC CCGCCCAGAT CGAGTACGCG GCCTCGGACG TGCTGCACCT GCACGCCCTG 
CGCGCCAAGC TCGACGCGAT GCTCGCCCGC GAGGAGCGGA CCGCCCTGGC CGAGGCCTGC 
TTCGCCTTCC TGCCGACGCG GGCGCGGCTC GACCTGCTCG GCTGGGACGA GGTGGACATC 
CTGGCGCACA GCTGA
 
Protein sequence
MPHRLHRGDL PDDYAPGPAI AVDTETLGLE PHRDRLCVVQ ISRGDGEADL VQIAKGGPEP 
VVLKRVLTDP AVTKIFHFAR FDLAVLFHRL GVMPGPIYCT KVASRLSRTY TDRHGLKDLV 
RELLGIEISK QQQSSDWGAE TLSPAQIEYA ASDVLHLHAL RAKLDAMLAR EERTALAEAC 
FAFLPTRARL DLLGWDEVDI LAHS