Gene M446_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5269 
Symbol 
ID6129311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5787466 
End bp5788197 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID641645404 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001772027 
Protein GI170743372 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0840951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.234791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGGC CCATGACGCA GGACAGCGCG CACGACCGCC AGAGCGAGTC GCGGCCCGGC 
CTCTCGGCCA GCATCCGCAG CCATCTCGGA AACCAGCTGC GGGTCGCCTA CGAGACGCTC
GGGGCGGAGG ATCCGAGCGG GCGCTTCGCG GAGCTGGTCG CCCGGCTGGA GGCGGCCCTC
GCCGCCGAGG GCCAGGTGGT CCGGCCCGAG TTCCGCGACG GGCTGCTGCA GGCGGTGCCC
TCCCTGCGCG CCTTCGCCCT GTCGCTCACC AGCAACGCCG CGCGGGCCGA CGACCTCGTG
CAGGACACGC TGCTGAAGGG CTGGCAGCAC CGGGCGCGGT TCCAGCCCGG CACCAACCTC
AATGCCTGGC TGTTCACCAT CCTGCGCAAC ATCTTCTACT CGGATCACCG CAAGCGGGTG
CGCGAGGTCG AGGACCAGGA CGGCTCCTAC GCGGCCCGCC TCGCCACGGC GCCCCACCAG
GGCGACCGGC TCGACGTGGA GGACCTGCAG AGCGCGCTGG CCAAGCTGCC GCCGGACCAG
CGCGAGGCGC TGGTGCTGGT GGGGGCGGAG GGCGTCTCCT ACGAGGAGGC AGCGGCGATC
ATGAACTGCA AGGTCGGCAC CGTGAAGAGC CGGGTCAGCC GCGCGCGCAG CCGGCTCGCC
GAACTTCTCG GCTACGACGA AGAGGATCTG GGCACCGACC GCCTGATCCA GTCGGCCATG
CCCAAGGAGT AG
 
Protein sequence
MRRPMTQDSA HDRQSESRPG LSASIRSHLG NQLRVAYETL GAEDPSGRFA ELVARLEAAL 
AAEGQVVRPE FRDGLLQAVP SLRAFALSLT SNAARADDLV QDTLLKGWQH RARFQPGTNL
NAWLFTILRN IFYSDHRKRV REVEDQDGSY AARLATAPHQ GDRLDVEDLQ SALAKLPPDQ
REALVLVGAE GVSYEEAAAI MNCKVGTVKS RVSRARSRLA ELLGYDEEDL GTDRLIQSAM
PKE