| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5245 |
|---|
| Symbol | |
|---|
| ID | 6135747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5762010 |
|---|
| End bp | 5763830 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641645380 |
|---|
| Product | chloride channel core |
|---|
| Protein accession | YP_001772003 |
|---|
| Protein GI | 170743348 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.258909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00444672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA AGCCCGAGAC CCTCCGACGC TCCCTCACCG ACGGCCCCGT CGTCCAGGCC
CCCGGCGGCC TGCGCGCCCT GGTGCGCGGC AGCGAGGTCG GGCTCGTCGG CCTCGCGATC
CTGGTCGGCT GCCTCGCCGG GCTCGCGGTC AGCGCCATGG CCTTCGCCAC GCAGGGGCTC
CACCGCCTGA TCTTCGGCCT CTCCGCGGAC GGGAGGCTCA GCGCCGCGCC CGCCCTGCCG
GCTCTCCTCG TCCTCACCGC GCCGGCCCTC GGCGGCCTGC TGCTCGGCCT CGTCCTCCGC
TTCGGCAACC GGCTCCGGCG CGGGCCGGGG CGGCCGGTGG TCGACCCGAT CGAGGCCAAC
GCCCTGCATG GCGGGCGCCT CAGCCTGCGG GATTCCGTGC TCGTCGCGCT CCAGAACCTG
ATCTCGAACG GCTGCGGCGC CTCGGTCGGC CTGGAGGCCG GCTACACCCA GCTCTCGGCC
GGGCTCGCCT CCCGCCTCGG GCTCGGCTTC GAGTTGCGGC GCTCCGACAT GCGGGTGCTC
GTCGGCTGCG GGGCGGCCGC CGCCATCGCG GCGGCCTTCG ATGCCCCCCT CACCGGCGCC
TTCTACGCCT TCGAACTGAT CATCGGCACC TACGCGGTCG CCTCCCTCAC CCCGGTCGTG
GTCTCGGCCC TGGTCGGCGC CCTGGTGGCC GGCTCCGTCC TGCCGCATCC GCCCGCCATC
ACCCTCGACC CGACCCCGCC GGTAACCCCC GCCGACTACC TGCCGACGCT CGGGCTCGGC
CTCCTCTGCG CCGGCCTCGG CATCCTGATC ATGCAGGGGG TGACCCTGAT CGAGGCCAGC
GTGCGCCGCA GCGGCGTGCC GACCATCGCC CGCCCGGCCC TCGGCGGCGT CCTGGTCGGG
CTCCTGGCGC TCGCCGCCTC GCCGCAGGTG CTCTCGGCCG GGCACGGGGC GCTCCACCTC
AACCTCGCGC AGGACGGGCC CGTCCTCGGC GCGGGCGCGC TGATCGGGCT GTTCTGCGCC
AAGGCCCTCG CCTCCGCGGT CTCGATCGGC ACCGGCTTCC GGGGCGGGCT GTTCTTCGCC
TCGCTCTTCC TCGGCGCCGT CGCCGGCAAG GCCTACGCGA TCCTGATGCC GCCGCTCATC
GCCACGGCGC TGCCGCCCAC CACCTACGCC ATCGTCGGGA TGAGCGCGCT CGCGGTCGCG
GTGATCGGCG GGCCGCTCAC CATGACCTTC CTGGCCCTGG AGATGACCGG GGACTTCGCC
GTGACCGCGC TGGTGCTGGC GGCGGTGATC GCCTCCTCCC TCACGGTGCG CAAGACCTTC
GGCTACTCCT TCGCCACCTG GCGCTTCCAC CTGCGGGGCG AGAGCATCCG CAGCGCCCAC
GACATCGGCT GGATCCGCAG CCTCACGGTC GGCCAGATGA TGCGCCGGGA GGTGCGCACC
GTCCGGGCCG ACACCACGCT GGCGGCCTTC CGGCGCGCCT TCCCGCTCGG CTCCGTGAGC
CAGGTCGTCG CCACCGACGA GGCCGGGCTC TATGCCGGGA TCGTGCTCGT GCCCGAGGCG
CACGCCGCCC CGATCGACGA GAAGGCCGGC ACCATGCGGG TCGCCGACAT CCTGCGCTGC
CACACCGACG TGCTGCTGCC GCAGATGAAC GCCAAGGAGG CCGCCGCGCT GTTCGACAGT
TCGGAGAGCG AGGCCCTGGC GGTGGTCGAG AGCCCGCAGC ACGCCCGCGT GATCGGCCTG
CTCACCGAGA AGCACACCCT GCGCCGCTAC AGCGAGGAAC TCGACCGCCA GCGGGCCGCC
ACGGTCGGCG AGGTGGGCTG A
|
|---|
| Protein sequence | MTAKPETLRR SLTDGPVVQA PGGLRALVRG SEVGLVGLAI LVGCLAGLAV SAMAFATQGL
HRLIFGLSAD GRLSAAPALP ALLVLTAPAL GGLLLGLVLR FGNRLRRGPG RPVVDPIEAN
ALHGGRLSLR DSVLVALQNL ISNGCGASVG LEAGYTQLSA GLASRLGLGF ELRRSDMRVL
VGCGAAAAIA AAFDAPLTGA FYAFELIIGT YAVASLTPVV VSALVGALVA GSVLPHPPAI
TLDPTPPVTP ADYLPTLGLG LLCAGLGILI MQGVTLIEAS VRRSGVPTIA RPALGGVLVG
LLALAASPQV LSAGHGALHL NLAQDGPVLG AGALIGLFCA KALASAVSIG TGFRGGLFFA
SLFLGAVAGK AYAILMPPLI ATALPPTTYA IVGMSALAVA VIGGPLTMTF LALEMTGDFA
VTALVLAAVI ASSLTVRKTF GYSFATWRFH LRGESIRSAH DIGWIRSLTV GQMMRREVRT
VRADTTLAAF RRAFPLGSVS QVVATDEAGL YAGIVLVPEA HAAPIDEKAG TMRVADILRC
HTDVLLPQMN AKEAAALFDS SESEALAVVE SPQHARVIGL LTEKHTLRRY SEELDRQRAA
TVGEVG
|
|---|
| |