Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5197 |
Symbol | |
ID | 6130935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 5721995 |
End bp | 5723572 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641645332 |
Product | phytoene desaturase |
Protein accession | YP_001771956 |
Protein GI | 170743301 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.128771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTCAGC CGCGTGAAGG CTACCGCACC CTGTCGGGGC GGCGTGCGGT GGTGGTGGGG GCGGGGCCGG GCGGACTCGC GGTGGCGCTG CTCCTCGCCC GGGAGGGCGT CCACGTCACC GTCGTGGAGA AGGACGACTG CGTCGGCGGG CGCACCCGCA CCGTGACGGC GCCGGGCGGC TACCGATTCG ACATCGGGCC GACCTTCTTC CTCTACCCGC GCATCCTCGC CGACATCTTC GCCTCCTGCG GCGAGCGGCT GGAGGACCAC GTCCGGCTGG AGCGGCTCGA TCCGCTCTAC CACCTCGTCT TCGAGGGCGG CGGCGAGATC CGCGCCACCT CGGACGTAAC CCGGCTCCAG GCCGAGATCG CCCGCATGGC GCCGGCCGAC GCCGCCAACG TGCCGCGCTA CCTCGCGGAC AACCGCGCCA AGCTCGAGGC CTTCCGGCCG GTGCTGGAAC AGCCCTTCGA CAGCCTGCGC AGCCTGGTCT CGGCGCCGAT GCTGAGGGCG CTGCCGCTCC TGCGCCCGCA CGCCACCGTG GACCGCGACC TGCAGCGCTA CTTCGCCGAC CCGCGGGTGC GCCTCGCCTT CTCGTTCCAG ACCAAGTACC TCGGGATGTC GCCGTTCCGC TGCCCGAGCC TGTTCACCAT CCTGAGCTTC CTCGAATACG AGCACGGGGT CTTCCATCCC GTGGGCGGCT GCGGCGCGGT CTCGGAGGCG ATGGCGGGGC TCGCCCGGCG GCTCGGCGTC GACATCCGCC TGGGCACCGC CGTCGACCGG GTGCTGTTCG AGGGAGACCG CGCGGTCGGG GTCGAGGCCG GGGGCGAGCG CCTGCCGGCC GATTCGGTGG TGGTGAACGG CGATTTCGCC AAGGTGGTGC GCGCCCTGGT GCCCGAGCGG CACCGGCCGC GCTGGCGCGA CGCCAAGCTC GACCGGGCGC GCCTCTCCTG CTCGACCTTC ATGCTCTATC TGGGCCTGGA GGGGCGGATG CCGGAGGGCC TCGGCCACCA CACGATCCTG CTCGCCGAGG AGTACCGGCG CAACATCGCG GAGATCTCGA CCGGTATCCT GCCGCGCCAG CCCTCGCTCT ACGTGCAGCA TGCCGGCTTC ACGGATGGCG GCATGGCGCC GCCCGGCCAT ACCAGCCTCT ACGTGCTGGT CCCGGTGCCG AACCTGCGCG CCGACATCGA CTGGGCGACG GTGCGGCCCC AGTATCGCCG CCTCGTCCTC GACCGGCTGA AGCTGCTCGG CCTGACCGAC ATCGAGCGGC GCATCCGCTA CGAGCGCATC GTCGATCCGA CCGACTGGCG CGACGCGTTC GCGGTCAACG AGGGGGCGAC GTTCAACCTG TCGCACGATC TCGGGCAGAT GCTGTATTTC CGGCCGCACA ACCGCTTCGG CCGCGGCCTG TACCTGGTCG GCGGCGGCAC CCATCCGGGC TCGGGCCTGC CGGTGATCTA CGAGGGCGCG CGCATCACCG CCCGGCTCCT GCTGGAGGAC CTCGCCCGGC AGGGCCGGCG CTCCCTGCCC GACCTCGCGC CGCCGCTCGA AGTCGCGCCG AGCGGGAAGG CGACGTGA
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Protein sequence | MLQPREGYRT LSGRRAVVVG AGPGGLAVAL LLAREGVHVT VVEKDDCVGG RTRTVTAPGG YRFDIGPTFF LYPRILADIF ASCGERLEDH VRLERLDPLY HLVFEGGGEI RATSDVTRLQ AEIARMAPAD AANVPRYLAD NRAKLEAFRP VLEQPFDSLR SLVSAPMLRA LPLLRPHATV DRDLQRYFAD PRVRLAFSFQ TKYLGMSPFR CPSLFTILSF LEYEHGVFHP VGGCGAVSEA MAGLARRLGV DIRLGTAVDR VLFEGDRAVG VEAGGERLPA DSVVVNGDFA KVVRALVPER HRPRWRDAKL DRARLSCSTF MLYLGLEGRM PEGLGHHTIL LAEEYRRNIA EISTGILPRQ PSLYVQHAGF TDGGMAPPGH TSLYVLVPVP NLRADIDWAT VRPQYRRLVL DRLKLLGLTD IERRIRYERI VDPTDWRDAF AVNEGATFNL SHDLGQMLYF RPHNRFGRGL YLVGGGTHPG SGLPVIYEGA RITARLLLED LARQGRRSLP DLAPPLEVAP SGKAT
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