| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5190 |
|---|
| Symbol | |
|---|
| ID | 6130928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5714193 |
|---|
| End bp | 5716208 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641645325 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001771949 |
|---|
| Protein GI | 170743294 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00612346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0328949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT CCCCCATCCT CCAGGTCGCC AATCCGGAGC GCGACCCGGA AGGTCTCATC
ACGAAGTACG TTCAGTTCGA GAGCTTCCGC CTCGTGCGGG ACCACCACCT CGACGACATG
ACCGGCTCGC TGCAGGATCG GCTCAAGGTC CTGATGTGGT ACCTGACGGA CTATCAGGCG
CACCGCAAGG CGCAGGGCAC GCGCTTCGAG ATGCCGCTGT CGCGCGCGCA GGTGGCGTTC
CTGAACCGGC CGATGCCGCT CGCCGGCCTG TCGCCGGCCG TGACCGTCGC CCTCTACAAT
TCCGTCGTGC GGGAACTGCC GAGCCACCTC AACCTGGCCG ATGTGCGCGT GCTGCGCGAA
GCCGTCTACT GGTGGTGCTT CGAGCGGACG ATCGACGCCA AGCTGCATCG CGCGCTCGTG
ACGCGGGAGC AGATCGCGGT CCTGCAGGCG CCGTCGAGCG CGCCGTACGC CGACTTCCCC
TTCAACATCT TCATGGAGAT CCAGTTCGAG CGCGACCGGG CCAAGCTCGA CCTGACCAGG
GACAAGGCCT CGGACCGCGC CGCCTATCTC TGCTACCTGA TCCTGTCGAG CTACACGCGG
CCCTACCTCA GGAGCTTCCT GCCGGGCAGT CAGGTCCGGC AGCTGCTGCG GGCGAGGGCG
GAGGCCGCCT CGCTCTTCGA CGAGATCATC GCGGCCGTCG CCCTGCCGCC GGGCGCGCCG
CCCTCCCGCG TGGCGGCCCT GCGCGGGCAG GCGGAGGCCC TCGCGGCCAA GCTGGCGAGG
CAGGGGGCCG GCGAGAGCAC GGCCGAGGTT CGGGATTACG GCGAGTTCCT GCTGCCGAAG
CGGGATTTCC CGCGCTCCCA CCCCGAACCC GGCGTCGCCC TGATCGGTCC GCTCCTCCAG
ACGTCGGGCC TCGGCCAGGC GACGCGCATC TCCTACGAGA TCCTGACGGC CGCCGAGCGC
GTGCGTCCCA CCGCGCTGCC CTTCGGCCTC GACAACCCGG CGCCCATCGG CTTCGCCACC
GAGCTGAACT TCGAGACCTT CACCGCTCCG CGCGAGATCA ACCTCATCCA CCTCAACGCC
GAATCGATTC CCCTGGTCTA CGCGTTCGAG CAGCGCGAGA TCGTGGCCAA CAGTTACAAT
ATCGGATATT TCTTCTGGGA GCTGAATCAG ATCCCGAAGT GCCATAATCT GGCGCTCGAT
CTGCTCGATG AGATCTGGGT CTCTTCGGAG TACAACCGCG AGATCTACGC CCGGTTCACC
GACAAGCCGG TGGTGAACGT GGGCATGGCG GTCGAGCCGC TGCCCGAGGT GGAGGCGATG
GACCTCGGCA GCCTCGGGCT GGAGCGCGAC GCGACAATCT TCCTCACCAC CTTCGACTCC
TTCTCCTTCA TCGAGCGCAA GAACCCGCTG GCCGCCGTCG AGGCGTTCCG GCAGGCCTTT
CCGCTCGGCA CCGAGGCGGT CGCCCTCGTC ATCAAGACCC AGAACAGGAC CCGGGTCGGC
GATCCGCACC AAGTGGCGAT CTGGAGGAAG ATCGACGACG CCTGCAGGGC GGACCCGCGG
ATCCTGATCG TCGACGAGAC GCTCAAGTAC AGGGACCTCC TCGCCCTCAA GAAGGCCTGC
GACTGCTACG TCTCGCTGCA TCGGTCCGAG GGCTGGGGCT TCGGCATGAT CGAGGCCATG
CAGCTCGAGC GGCCGGTGAT CGCGACGGCC TATGGCGGCA ACATGGATTT CTGCAGCGAG
GAGAGCGCCT ACCTGATCGG GTACGACCTC GTCGGGGTGC AGAGGGACGA GTACATCTTC
GTCGAGCGCG GCAGCGTCTG GGCCGATGCC GACCTCCGGC AGGCCGCCGC CGCCATGCGC
CACGTCGCGA CCGACCAGGC CGCGGCGCGC GCCAAGGGCG TGAGCGCGGC CCGTCTCGTC
AAGGCGCGTT TCAGCATCCC GGCGATCGCG AAGCGCTACG GCGCGCGGCT GGAGGAGATC
CGCGCCGCGC CCGCTCGCCG CCTGGCCGCC TCGTGA
|
|---|
| Protein sequence | MSSSPILQVA NPERDPEGLI TKYVQFESFR LVRDHHLDDM TGSLQDRLKV LMWYLTDYQA
HRKAQGTRFE MPLSRAQVAF LNRPMPLAGL SPAVTVALYN SVVRELPSHL NLADVRVLRE
AVYWWCFERT IDAKLHRALV TREQIAVLQA PSSAPYADFP FNIFMEIQFE RDRAKLDLTR
DKASDRAAYL CYLILSSYTR PYLRSFLPGS QVRQLLRARA EAASLFDEII AAVALPPGAP
PSRVAALRGQ AEALAAKLAR QGAGESTAEV RDYGEFLLPK RDFPRSHPEP GVALIGPLLQ
TSGLGQATRI SYEILTAAER VRPTALPFGL DNPAPIGFAT ELNFETFTAP REINLIHLNA
ESIPLVYAFE QREIVANSYN IGYFFWELNQ IPKCHNLALD LLDEIWVSSE YNREIYARFT
DKPVVNVGMA VEPLPEVEAM DLGSLGLERD ATIFLTTFDS FSFIERKNPL AAVEAFRQAF
PLGTEAVALV IKTQNRTRVG DPHQVAIWRK IDDACRADPR ILIVDETLKY RDLLALKKAC
DCYVSLHRSE GWGFGMIEAM QLERPVIATA YGGNMDFCSE ESAYLIGYDL VGVQRDEYIF
VERGSVWADA DLRQAAAAMR HVATDQAAAR AKGVSAARLV KARFSIPAIA KRYGARLEEI
RAAPARRLAA S
|
|---|
| |