Gene M446_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5170 
Symbol 
ID6133430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5684030 
End bp5686096 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content75% 
IMG OID641645304 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001771929 
Protein GI170743274 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0500187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC CGTCCCCGCG GCCGGAGGAG GAGCGCGTCA ACATCCTGCT GGTCGACGAC 
CAGCCGGCCA AGCTGCTCAG CTACGAGGTC ATCCTGAGCG AGCTGGGGGA CCGGCTGATC
AAGGCCAGCT CGGCCCGGGA GGCGCTGGAG CACCTGCTGC GCACCGAGAT CGCCGTGGTG
CTGATCGACG TCTGCATGCC CGAACTCGAC GGGATCGAGC TCGCCACGAT GATCCGCGAG
CACCCGCGCT ACCAGCACGT GGCGATCATC TTCGTCTCGG CGATCCAGAT CAGCGACCTC
GACCACCTGC GCGGCTACGA GGCGGGGGCG GTCGATTACG TGCCGGTGCC GGTGGTGCCG
GCGGTGCTGC GCGCGAAGGT CCGGATCTTC GCCGAACTCT ACCGCAAGAC CCGGCAGCTG
GAGCGGCTGA ACGCCGAGCT GGAGCAGCAC GTGGCCGAGC GCACGGCCGC CCTGGAGGCC
TCGACGGCGC GCCTGCGCGA GAGCGAGCAG CGGCGCAGCC TCGCGCTGGC CGCCGGCCGC
ATGGGCGCCT GGGACTGGGA CCCGGCGACC CGCAGCTACA GCTGGGACGC GGGCCAGTAC
CGGCTGTTCG GGGTCGATCC GGCGGCCTTC GTGCCGACGC CGGAGGCGGT CGAGGCGCTG
ATCCACCCGG AGGACCGGGA GCGCCTGCGG GCGCTCGGCC GCCACGCGGC GCGCACGGGC
GAGCCCTTCG ACGCGGAATT CCGGATCCTG CGGCCGGACG GGGAGACGCG CTGGTGCGCG
GCCTCCGCGG CGACGACCCT CGACGCCGCC GGGCGGCGGC TCAGCGGCGT CACCTACGAC
ATCACGGCGC GCAAGCGCGC CGAGGAGGCG CTGATCGACC TCAACCGCGA GCTGGAGGGG
CGGATCGAGG AGCGCACGCG CGAGCGGGAG GCGGCCCTCG CCCAGCTCTT CGAGGCGCAG
AAGCTCGACA CGATCGGCCA GCTCACCGGT GGCGTGGCGC ACGATTTCAA CAACCTGCTG
ATGGCGGTGC TGGGCTCGCT CGAACTCCTG GAGAAGCGCC TCGACCCGCA GGACGACCTC
GCCCGGCGCC TCCTCGGCAA CGCCGTGCAG GGGGCGCAGC GCGGCGCCGC CCTGACGCAG
CGGCTCCTCG CCTTCGCCCG GCGCCAGGAG CTGCGCCCCG AGACCGTGGC GGTGGCCGAC
CTCGTCGAGG GGATGCGGGG CCTGCTGGAG CGGGCGCTCG GGCCGAGCGT CGCCCTGGAG
ACCCGCCTGC CGGCCGACCT GCCGCCGGTG CGCATCGACG CCAACCAGTT CGAACTCGCG
CTCCTCAACC TCGCGGTGAA TGCCCGCGAC GCCATGCCGA CCGGCGGCAC GATCACGCTC
GAGGGCGGCA GCGTCGCGGC GGCGCCGGGC CTGCCCCCCG GCGCCTACGT GCGGGTCGCC
CTCGCCGATA CCGGCACGGG CATGGATGCG GCCACCCTGG CCAAGGCGAC CGAGCCCTTC
TTCACCACCA AGGGGCCGGG CAAGGGCACC GGGCTCGGCC TGTCGATGGT GCAGGGGCTG
ATGGCGCAGT CGGGCGGGAC GCTGCGGGTG TCGAGCGCGC CGGGGCAGGG GACCACGGTC
GCCCTCTGGC TGCCCGCCGC CGCCCCGGTC GAGGCGCGGG AGAACCCGGC GCGGGCGGCG
CTGCCGGGTC TGGCCGAGAT CCCGCCCTCG ACGGTTCTGG TGGTGGACGA CGATCCGCTG
GTGCGGCTCG GCACCGCGGC GATGCTGGAG GATCTCGGCC ACGTCGCCCT GGAGGCGGCC
TCGGCCGCCG AGGCGCTGGC CCTGATCGAG GGGAGGGCCG GCATCGACGC CGTGGTGACG
GACCACGCCA TGCCGGGCAT GACGGGCCTC GACCTCGCCC GCGCCCTGCG CGCGGCGCAT
CCCGGCCTGC CGGTGATCCT GGCCACCGGC TACGCGGAAC TGCCGAGCGA GGACGAGCTG
GCGCTGCCCC GCCTCGCCAA GCCCTTCAGC CAGGATGAGC TGGCGCTGCA GCTCGCGGCG
GTGCTGGCGG TGGTGACGGC GGCCTGA
 
Protein sequence
MAAPSPRPEE ERVNILLVDD QPAKLLSYEV ILSELGDRLI KASSAREALE HLLRTEIAVV 
LIDVCMPELD GIELATMIRE HPRYQHVAII FVSAIQISDL DHLRGYEAGA VDYVPVPVVP
AVLRAKVRIF AELYRKTRQL ERLNAELEQH VAERTAALEA STARLRESEQ RRSLALAAGR
MGAWDWDPAT RSYSWDAGQY RLFGVDPAAF VPTPEAVEAL IHPEDRERLR ALGRHAARTG
EPFDAEFRIL RPDGETRWCA ASAATTLDAA GRRLSGVTYD ITARKRAEEA LIDLNRELEG
RIEERTRERE AALAQLFEAQ KLDTIGQLTG GVAHDFNNLL MAVLGSLELL EKRLDPQDDL
ARRLLGNAVQ GAQRGAALTQ RLLAFARRQE LRPETVAVAD LVEGMRGLLE RALGPSVALE
TRLPADLPPV RIDANQFELA LLNLAVNARD AMPTGGTITL EGGSVAAAPG LPPGAYVRVA
LADTGTGMDA ATLAKATEPF FTTKGPGKGT GLGLSMVQGL MAQSGGTLRV SSAPGQGTTV
ALWLPAAAPV EARENPARAA LPGLAEIPPS TVLVVDDDPL VRLGTAAMLE DLGHVALEAA
SAAEALALIE GRAGIDAVVT DHAMPGMTGL DLARALRAAH PGLPVILATG YAELPSEDEL
ALPRLAKPFS QDELALQLAA VLAVVTAA