Gene M446_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4876 
Symbol 
ID6132970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5355599 
End bp5356564 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content78% 
IMG OID641645012 
ProductAraC family transcriptional regulator 
Protein accessionYP_001771639 
Protein GI170742984 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.395791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0827017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCC CGCGACGCCG CGTCGAGATC CTGGCCTTCC CGGACGTCCA GCTCCTCGAC 
GTCGCCGGGC CGCTCCAGGT CTTCGCCTCC GCCAACGACG AGGCCGGGCC TGACCGGCCC
TACGATCCCG TCGTGGTCGC CCGCGAACCC TGCGTGACGG CCTCGGCGGG CCTGGGCCTG
GTCGCGGCCC CGCTGCCCCG GGCCGACGCC CCCCTCGACA CGCTCGTGGT GGCCGGCGGC
CGCGGGGTCG AGGCCGTGAG CCGCGACCCG GCGATGCTCG CCTTCGTCCG GCAGCGCGCC
GCGGCGGCCG CCCGCACCGC CTCGGTCTGC ACCGGGGCCT TCGTGCTCGC CGCGGCCGGG
CTCCTCGACG GGCGCCGGGC CGTCACGCAT TGGGACCATT GCGGCCTCTT CGCCGAGCGC
TTCCCGCGGG TGCGGCTCGA TCCCGATCCG ATCTTCGTGC GGGACGGCGC CGTCTGGACC
TCGGCCGGCG TCACGGCGGG AATCGATCTC GCCCTCGCGA TGGTCGAGGA GGATCTCGGC
CGGGCGGCGG CCCTCGCGGT CGCCCGGCGC CTCGTCGTGT TCCTCAAGCG CCCCGGCGGG
CAGGCGCAGT TCAGCACCGT GCTGGCCCTC CAGGCCGAGC CGGGCCGCTT CGACGGGCTG
CATGCCTGGA TCGCCGGCCA CCTGCGCGGC GACCTCTCCC TGCCGGTCCT CGCCGCCCGG
GCGGGGATGA GCGCCCGCAG CTTCTCGCGC CACTACCGGC AGGCGACCGG CCGCACCCCC
GCCCGCGCCG TCGAGGCGAT CCGGGTCGAG GCGGCCCGGC GCCTGCTGGA GCAGGGCGCG
CCGGTCGCCC GGGCGGCGGC GCGCTGCGGC TTCGGCTCCG AGGAGACGAT GCGGCGCGGC
TTCCTGCGGG TGCTCGGCAC CGCGCCCCGG ACCTACCGGG AGCGCTTCGC CGGGCCGTCC
GCCTGA
 
Protein sequence
MPIPRRRVEI LAFPDVQLLD VAGPLQVFAS ANDEAGPDRP YDPVVVAREP CVTASAGLGL 
VAAPLPRADA PLDTLVVAGG RGVEAVSRDP AMLAFVRQRA AAAARTASVC TGAFVLAAAG
LLDGRRAVTH WDHCGLFAER FPRVRLDPDP IFVRDGAVWT SAGVTAGIDL ALAMVEEDLG
RAAALAVARR LVVFLKRPGG QAQFSTVLAL QAEPGRFDGL HAWIAGHLRG DLSLPVLAAR
AGMSARSFSR HYRQATGRTP ARAVEAIRVE AARRLLEQGA PVARAAARCG FGSEETMRRG
FLRVLGTAPR TYRERFAGPS A