Gene M446_4774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4774 
Symbol 
ID6130058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp5250447 
End bp5251466 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID641644911 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001771538 
Protein GI170742883 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.572869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.214475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGA TCTCGCGCCG CCGCGCGCTC CAGCTTTCCC TCGCGGGCGC CGTCGCGGCC 
CCGGCCGTGA TGCGGATCAG CCGCGCGCAG GCCGCCGACT TCAACCTCAA GGTCGCCAAC 
AACAGCCCGG TCAGCCATCC GCTCACCATC TACATGCAGA AGGCCGCGGA CGGGATCCGC 
GAGGAGACCG GCGGCAAGGT CGACATCAAG GTCTTCCCGA ACAACCAGCT CGGCGGCGAC 
ACCGACATGC TGAGCCAGCT GCGCTCGGGG GCGCTCGAGT TCTTCAGCCT CTCGCCGCTG 
ATCCTGGCGA CCCTGGTGCC CGGCGCGGCG ATCAGCGGCA TCGGCTTCGC GTGGTCGTCC 
TACGACAAGC TGTGGCCGGC CATCGACGGC GATCTCGGCG CCCATGTCCG CGAGCTGATC 
GGCAAGTCGG GCCTCTACGC CTTCGACCGC ATCTGGGAGA ACGGCTTCCG CCAGACCACC 
TCCTCCACCA AGCCGATCCT GACGCCGGAC GACTTCAAGG GCTTCAAGAT CCGGGTCCCG 
CCGAGCCCGC TCTGGACCTC GATGTTCAAG GCCTTCGACG CGGCGCCGAT GACCATCAAC 
TTCGCGGAGG TCTACTCGGC CCTGCAGACC AAGATCGCGG AGGGCCAGGA GAACCCGCTC 
GCGCTGATCG ACGCGGCCAA GCTCTACGAG GTGCAGAAGC ACCTCTCGAA GACGAACCAC 
ATGTGGGACG GCTTCTGGCT GCTCGCCAAC GGCAAGGTCT GGCGCGGCCT GCCGGAGGAC 
GTGCGCGGCG TGATCGCCAA GCACTTCAAC ACCCAGGCGG TGGCGCAGCG CGAGGAGACG 
GCGCGCCGCA ACGTCTCGAC CGAGAAGGAC CTCGCGGCCA AGGGCCTGAC CTTCCACGAC 
GTGGACACCA AGGCGTTCCA GGCCAAGCTG CAGGCGGCCG GGTTCTACAA GGAGTGGAAG 
GGCAAGTTCG GCCCGGAGGC GTGGGCGCTG CTCGAGAAGC ACACCGGCCC GATCGCCTGA
 
Protein sequence
MTSISRRRAL QLSLAGAVAA PAVMRISRAQ AADFNLKVAN NSPVSHPLTI YMQKAADGIR 
EETGGKVDIK VFPNNQLGGD TDMLSQLRSG ALEFFSLSPL ILATLVPGAA ISGIGFAWSS 
YDKLWPAIDG DLGAHVRELI GKSGLYAFDR IWENGFRQTT SSTKPILTPD DFKGFKIRVP 
PSPLWTSMFK AFDAAPMTIN FAEVYSALQT KIAEGQENPL ALIDAAKLYE VQKHLSKTNH 
MWDGFWLLAN GKVWRGLPED VRGVIAKHFN TQAVAQREET ARRNVSTEKD LAAKGLTFHD 
VDTKAFQAKL QAAGFYKEWK GKFGPEAWAL LEKHTGPIA