Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4762 |
Symbol | |
ID | 6134793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 5236065 |
End bp | 5237339 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641644899 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001771526 |
Protein GI | 170742871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.78314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTTC CCGCGCCGGC CGCGCCGCGG CGGCACGCCC GTGCCCTGCT GGCCACGACC CTCCTGGCCT CGACCGTCCT GCTCGGCCTG CCGGTCCGCG ACGCGCGGGC GGCGGATCCG CTGCGCATCG CGGTGATCGC CGAGGCCCAG GCCATCGCCG GCGCCGCGAT CCCGCAGGCC GCCCAGCTCG CCGCCGACGA GATCAATGCC AAGGGCGGCG TCGACGGGCG CAAGATCGAG CTCTTCACCT ACGACAACAA GAGCTCCGCG GCCGATTCGG TCCGGGCCTT CCAGCGCGCC GCCAGCGAGG ACAAGGTCCA CGCGGTCATC GCCAGCTACA TCAGCGAGGT CGTGCTCGCG CTCCAGCCCT GGTCGGCCCG CCTCAAGCTG CCCTTCATCA CCCCGGGCGC CGCCTCGAAC GAGATCCCGC TCAACGTCCA CAAGGATTAC GCCCGCAACA AGTACTCCTT CCACGGCTAC CTCACCTCCA AGGCCCAGTC GCAGGCGGTC TGCGACGCCA CCAAGGCGAT CCTGGTCGAG GGCCGCAAGA TGAAGACGGC CGTCATCATG AGCGAGGACG CCGCCTGGAC GAAGCCCCTC GACGAGGGCT ACAAGGAGTG CCTGCCCCAG ATCGGCCTGC AGGTGCTGGA CCACATCCGG TTCTCGCCGA GCACGACCGA TTTCAGCCCG ATCTTCAGCC GCATCGAGGG CGCCAAGCCG GACGTGATCG TCACCGGCAT CTCCCACGTC GGCGTGCAGC CGACGGTGCA ATGGGCGAGC CAGCAGGTGC CGATCCCGAT GATCGGCATC GCCTCGCAGG CCACCAACTC CACCTTCTGG AAGGAGACCA ACGGCGCGAC CGAGGGCGTG CTGTTCGAGA TGTTCGCGGC GCCCGGGACC AACGTCACGC CCAAGACCGC CCCCTTCGCG GAGGCCTTCA AGGCCAAGTA CGGCAGCTAT CCGGGCTACG CGGGCTACAC CGCCTACGAC GAGGTCTACT ACATCGCCGA TGCCGTGAAG CGGGCCGGCT CGACCGATCC CGACAAGCTC GTGGACGCGC TGGAGAAGAC CGACTGGGAG GGCACGCTCG GGCGCATCCA GTTCTACGGC AAGGACGATC CCTTCACCCA CTCGATCAAG TACGGGCCGG GCCTCGTCTC CGGCATGATG ATGCAGTGGC AGGACGGCAA GCAGCTGGCC GTCTGGCCGC AGACCGTCGC GAACGGGAGC CTGAAGTTCC CGAGCTTCGT GAAGGCCGGC ACGCCCGCCA ACTGA
|
Protein sequence | MSVPAPAAPR RHARALLATT LLASTVLLGL PVRDARAADP LRIAVIAEAQ AIAGAAIPQA AQLAADEINA KGGVDGRKIE LFTYDNKSSA ADSVRAFQRA ASEDKVHAVI ASYISEVVLA LQPWSARLKL PFITPGAASN EIPLNVHKDY ARNKYSFHGY LTSKAQSQAV CDATKAILVE GRKMKTAVIM SEDAAWTKPL DEGYKECLPQ IGLQVLDHIR FSPSTTDFSP IFSRIEGAKP DVIVTGISHV GVQPTVQWAS QQVPIPMIGI ASQATNSTFW KETNGATEGV LFEMFAAPGT NVTPKTAPFA EAFKAKYGSY PGYAGYTAYD EVYYIADAVK RAGSTDPDKL VDALEKTDWE GTLGRIQFYG KDDPFTHSIK YGPGLVSGMM MQWQDGKQLA VWPQTVANGS LKFPSFVKAG TPAN
|
| |