Gene M446_4762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4762 
Symbol 
ID6134793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5236065 
End bp5237339 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID641644899 
Productextracellular ligand-binding receptor 
Protein accessionYP_001771526 
Protein GI170742871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.78314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC CCGCGCCGGC CGCGCCGCGG CGGCACGCCC GTGCCCTGCT GGCCACGACC 
CTCCTGGCCT CGACCGTCCT GCTCGGCCTG CCGGTCCGCG ACGCGCGGGC GGCGGATCCG
CTGCGCATCG CGGTGATCGC CGAGGCCCAG GCCATCGCCG GCGCCGCGAT CCCGCAGGCC
GCCCAGCTCG CCGCCGACGA GATCAATGCC AAGGGCGGCG TCGACGGGCG CAAGATCGAG
CTCTTCACCT ACGACAACAA GAGCTCCGCG GCCGATTCGG TCCGGGCCTT CCAGCGCGCC
GCCAGCGAGG ACAAGGTCCA CGCGGTCATC GCCAGCTACA TCAGCGAGGT CGTGCTCGCG
CTCCAGCCCT GGTCGGCCCG CCTCAAGCTG CCCTTCATCA CCCCGGGCGC CGCCTCGAAC
GAGATCCCGC TCAACGTCCA CAAGGATTAC GCCCGCAACA AGTACTCCTT CCACGGCTAC
CTCACCTCCA AGGCCCAGTC GCAGGCGGTC TGCGACGCCA CCAAGGCGAT CCTGGTCGAG
GGCCGCAAGA TGAAGACGGC CGTCATCATG AGCGAGGACG CCGCCTGGAC GAAGCCCCTC
GACGAGGGCT ACAAGGAGTG CCTGCCCCAG ATCGGCCTGC AGGTGCTGGA CCACATCCGG
TTCTCGCCGA GCACGACCGA TTTCAGCCCG ATCTTCAGCC GCATCGAGGG CGCCAAGCCG
GACGTGATCG TCACCGGCAT CTCCCACGTC GGCGTGCAGC CGACGGTGCA ATGGGCGAGC
CAGCAGGTGC CGATCCCGAT GATCGGCATC GCCTCGCAGG CCACCAACTC CACCTTCTGG
AAGGAGACCA ACGGCGCGAC CGAGGGCGTG CTGTTCGAGA TGTTCGCGGC GCCCGGGACC
AACGTCACGC CCAAGACCGC CCCCTTCGCG GAGGCCTTCA AGGCCAAGTA CGGCAGCTAT
CCGGGCTACG CGGGCTACAC CGCCTACGAC GAGGTCTACT ACATCGCCGA TGCCGTGAAG
CGGGCCGGCT CGACCGATCC CGACAAGCTC GTGGACGCGC TGGAGAAGAC CGACTGGGAG
GGCACGCTCG GGCGCATCCA GTTCTACGGC AAGGACGATC CCTTCACCCA CTCGATCAAG
TACGGGCCGG GCCTCGTCTC CGGCATGATG ATGCAGTGGC AGGACGGCAA GCAGCTGGCC
GTCTGGCCGC AGACCGTCGC GAACGGGAGC CTGAAGTTCC CGAGCTTCGT GAAGGCCGGC
ACGCCCGCCA ACTGA
 
Protein sequence
MSVPAPAAPR RHARALLATT LLASTVLLGL PVRDARAADP LRIAVIAEAQ AIAGAAIPQA 
AQLAADEINA KGGVDGRKIE LFTYDNKSSA ADSVRAFQRA ASEDKVHAVI ASYISEVVLA
LQPWSARLKL PFITPGAASN EIPLNVHKDY ARNKYSFHGY LTSKAQSQAV CDATKAILVE
GRKMKTAVIM SEDAAWTKPL DEGYKECLPQ IGLQVLDHIR FSPSTTDFSP IFSRIEGAKP
DVIVTGISHV GVQPTVQWAS QQVPIPMIGI ASQATNSTFW KETNGATEGV LFEMFAAPGT
NVTPKTAPFA EAFKAKYGSY PGYAGYTAYD EVYYIADAVK RAGSTDPDKL VDALEKTDWE
GTLGRIQFYG KDDPFTHSIK YGPGLVSGMM MQWQDGKQLA VWPQTVANGS LKFPSFVKAG
TPAN