Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4743 |
Symbol | |
ID | 6134866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 5212788 |
End bp | 5214161 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641644880 |
Product | TRAP-type uncharacterized transport system periplasmic component-like protein |
Protein accession | YP_001771507 |
Protein GI | 170742852 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.704005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAGGC TTCGCTTCGG CCGGGAACTG CTCTTCCTGA TCGTCGCGGT GCTGCTCGCC GCCGGCGGCG TCCTCGCGAG CCTGCTCACC CGGGCGACGG TGCTGACGGT CGCGGTCGCC CCGAGCGGCG GGACCGAGCC GGCCCTGCTG CGCGCCTATG CCGAGGCGCT GGCCGTGAAC CGCCGCGGCC TGCAGCTGAC TATCCTGCCC TTCGACGGGG TGCGGGAGAG CGCGCTGGCG CTGCAGGAGG GGCGGGCCGA CCTCGCGGTG GTGCGGCCCG ACATCCTGAT GCCGGGCAAC GGCCTCACCC TCGCGGTGCT GCGCAGCCAG GCGGTCATGG TGGCGGTGCC CGAGCCCTCC CCGATCAAGG CGCTCCCGGA CCTCGCCCGC AAGCGGCTCG GCCTCCTGGC CGACCGGGTC TCGGACCGCG ACGTGGTCCG GCGGGTGCTG GAGCATGCCG GCCTCGCCCC GGTCGAGAAC CCGGCCCCCG GCATGCCGGC CCCGGGCAGC GTCGGGCTGG TGCCGGTCCA GGAGCAGGAC CTCGCCGCCT TCCTGGCCGA GAAGCGCATC GACGCGGTGA TCCTCCTCAC CACCCCGACG ACCGCGGCGG CCCAGCGCAT CCTGCGCGTC GTCCAGGCGG CCGGGCGCGC CCGCAAGGCG CGGCTGATCG GGGTCGAGGA CGGCGCGGCC CTCACCGAGC GCGATCCGCG CCTGCAGGCC GTCACGGTGC CGGCCGGCCT CTTCCCCGGC ACGCCGGGCC TGCCCGCGGA GGACCTCGCG ACGGTCGGCA CCTCCTACCG GCTGATGGCC CGCGCCAGCC TGCCGCGACC CGCCGCCGCG GAGGTCACCC AGCACCTGTT CGAGCTGCGC GGCCTGCTCG CCCAGACGGT GCCGGCCGCG AACGCCGTCG CGGCGCCCAG CTACGAGACC AACGCGGAGG CGACCAGCGC GCGCCTGCCG ATCCACCCGG GCGCCATCGA CTATTACGAG CGCGAGCAGC AGAGCCTGAT CGAGCGCTAC GAGACCTGGA TCTACCTCGT CGCGCTGCTC GGCGGCGGGC TCGGTTCGGC CGGGGCGTGG CTGCGCCAGC GACTGATGCG CATGCGCCGC GAGCGGGTCG AGGTCGCGAC CCGCCGGCTG CTGCAGATCC GCTCGGAGGC GCGCCGCAGC AGCGACCGGG CCGCCCTCGA CGGGATGGCG GCCGAGATCG ACGATCTCGC GGGCAACATC GCCCGCTACG CCCTCAGCCG CCCGACGGAG GTCCGCACCA TGACGGCGGC CACGATCGCG ATCGACGCCG CGCGCTCGAC CGTTCGCCGC GCCCGCGACG GGGCCGGGGA TCCGCCCCGG CCGGGCCTGC GGGCGGTCGA GTGA
|
Protein sequence | MPRLRFGREL LFLIVAVLLA AGGVLASLLT RATVLTVAVA PSGGTEPALL RAYAEALAVN RRGLQLTILP FDGVRESALA LQEGRADLAV VRPDILMPGN GLTLAVLRSQ AVMVAVPEPS PIKALPDLAR KRLGLLADRV SDRDVVRRVL EHAGLAPVEN PAPGMPAPGS VGLVPVQEQD LAAFLAEKRI DAVILLTTPT TAAAQRILRV VQAAGRARKA RLIGVEDGAA LTERDPRLQA VTVPAGLFPG TPGLPAEDLA TVGTSYRLMA RASLPRPAAA EVTQHLFELR GLLAQTVPAA NAVAAPSYET NAEATSARLP IHPGAIDYYE REQQSLIERY ETWIYLVALL GGGLGSAGAW LRQRLMRMRR ERVEVATRRL LQIRSEARRS SDRAALDGMA AEIDDLAGNI ARYALSRPTE VRTMTAATIA IDAARSTVRR ARDGAGDPPR PGLRAVE
|
| |