Gene M446_4510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4510 
Symbol 
ID6130004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4966854 
End bp4969607 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content71% 
IMG OID641644650 
Productexcinuclease ABC subunit B 
Protein accessionYP_001771285 
Protein GI170742630 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC CGAAGAAACC GCGCCCGTCC TCGGCCAAGG CGTCGAAGCC CGAACTGAAG 
CCGCTGGACC CCTTCCTCGC CGAATTGCTG AACCCGGCCC TCAACCGCGA GCGGCTGCCC
GCGCCGGAGC CGCAGGCGGC GCCGGAGCCC GGGCCGCGCC GGCGCGGGCG GCCCCGGAAG
GCCGAGCCCG GATTCGGCGA GGCGCCGCAG GCCGCCTTCG CGCACGGCGC CGTGACGGAT
GTCGATCCGG CCCTCGCCAA GTCCCTCGGC CTGCGCACCC CCGACGACGG GCCGGACCTC
GCCGAGGAGC CGGGCGCCTC GCTCGCCGCG GCCGGGGTCT CGGCCACGGT CGACGCGCTC
ACCAAGCTCC TCACCGAGGG CAACCCGCTG TTCAAGGACG GCAAGCCCTG GGTGCCGCAC
CGGCCGGAGC GGCCGCAGAA ATCCGAGGGC GGCGTTGCCT TCCGGCTGAA ATCCGATTTC
AGCCCGGCCG GCGACCAGCC CAAGGCCATC GCCGACCTCG TCGAGGGCGT GCGGCGCAGC
GAGCGCGACC AGGTGCTGCT CGGCGTCACC GGCTCCGGCA AGACCTTCAC GATGGCCAAG
GTCATCGAGG AGACCCAGCG CCCCGCCCTC ATCCTGGCCC CGAACAAGAC GCTCGCCGCC
CAGCTCTACG GCGAGTTCAA GGCCTTCTTC CCCGACAACG CGGTCGAGTA CTTCGTCTCG
TACTACGATT ATTATCAGCC CGAAGCCTAC GTGCCGCGCT CCGACACCTT CATCGAGAAA
GAATCGTCGA TCAACGAGCA GATCGACCGG ATGCGCCACT CGGCCACGCG GGCGCTGCTG
GAGCGCGACG ACGTCATCAT CGTCGCCTCG GTCTCCTGCA TCTACGGCAT CGGCTCGGTG
GAGACCTACA CGGCGATGTC GTTCACGGTG ACGCTGGGCG AGCGCATCGA GCAGCGCCAG
CTCATCGCCG ACCTCGTGGC CCTGCAGTAC AAGCGGATCC AGTCCGACTT CGCCCGCGGC
ACCTTTCGGG TGCGCGGCGA CGTGATCGAG CTCTGGCCGG CCCACCTGGA GGATCGCGGC
TGGCGCATCG GCCTGTTCGG CGACGAGGTC GAGGCGATCA CGGAATTCGA CCCGCTCACC
GGCAAGACCA TCAACCCGCT GAAATTCGTC AAGATCTACG CCAACAGCCA CTACGTGACG
CCGCGCCCGA CCCTCCAGCA GGCGGTCAAG GGCATCAAGG ACGAGCTGAA GCGGCGGGTC
GAGGAGCTGA CCCGGATGGG CCGGCTGATC GAGGCGCAGC GGCTGGAGCA GCGCTGCACC
TTCGACCTGG AGATGATCGA GGCGACGGGC GCCTGCAACG GCATCGAGAA CTACTCGCGC
TACCTGACGG GCCGCAAGCC GGGCGAGCCG CCCCCGACCC TGTTCGAGTA CCTGCCCGAC
AACGCCCTCG TCTTCACGGA CGAGAGCCAC GTCACGATCT CGCAGATCGG CGGCATGTAC
CGGGGCGACT TCCGCCGCAA GGCGACCCTC GCCGAGTACG GCTTCCGCCT GCCCTCCTGC
CTCGACAACC GGCCGCTGCG CTTCGAGGAA TGGGACGCGA TGCGGCCGCA ATCGATCCAC
GTCTCGGCGA CGCCGGCCAA GTGGGAGATG GAGCAGACCG GCGGCGTCTT CGTCGAGCAG
GTCATCCGCC CGACCGGCCT CGTCGACCCG GAGGTGATCA TCCGCCCGGC CCGCTCCCAG
GTGGACGACC TGCTCGGGGA GGTGAAGGAG GTCGCCGCCG CGGGCTACCG GACCCTGGTC
ACCACGCTCA CCAAGCGCAT GGCCGAGGAC CTGACCGAGT ACCTGCACGA GAACGGGGTG
CGGGTGCGCT ACATGCACTC GGACATCGAC ACGCTGGAGC GGATCGAGAT CATCCGCGAC
CTGCGGCTCG GCGCCTTCGA CGTGCTGATC GGCATCAACC TGCTGCGCGA GGGGCTCGAC
ATCCCGGAAT GCGCGCTGGT CGCGATCCTG GACGCGGACA AGGAGGGGTT CCTGCGCTCC
GAGACCTCGC TGATCCAGAC GATCGGCCGC GCGGCCCGCA ACGCAGAGGG GCGGGTGATC
CTCTACGCGG ACCAGCGCAC CGGCTCGATG GACCGGGCCA TCGCCGAGAC CGAGCGGCGC
CGGGCCAAGC AGCTCGCCTA CAATGCCGAG CACGGCATCA CGCCCCAGAG CGTGAAGCGC
AACATCGCCG ACATCCTGGA GAGCGTCTTC GAGCGCGACC ACGTCCAGGT GGACACGGGA
CTGGCCAAGG GCGGCGTCAC GGTCGGCCAC AACCTCAAGG CCGTGATGGC GGATCTGGAG
AAGCGCATGC GCGCGGCCGC CGCCGACCTC GACTTCGAGG AGGCGGCGCG GCTGCGCGAC
GAGCTCAAGC GGCTCCAGGC GACGGAACTC GCCATCGCGG AGGACCCGCT GGCCCGCCAG
GGGGCGGTGG AGGACCAGGC CGGGCGCTAC GGCGAGAAGG GCGGGCGGCG CCGCTACGGC
CGCAACGCCG ACCTGCCGCC GGGCACTGGC GGGGCGGAGG AGCCGCTCGG GTCCGGGCCG
CTGGGCAAGG GCGTGTCGGA CGAGGGCACC CGCATCCGCA GGCCGACCCT CGACGAGATG
GGGCCGGGGA CCGACCGGGA GATCCCGATC TTCACCGAGC GGCCGGCGGC GCGCTCGACG
CAGGGCTTCC CGGGGCAGCG GCCGAAATAC AAGGGCCGCA AGGGGCGGGG CTGA
 
Protein sequence
MPAPKKPRPS SAKASKPELK PLDPFLAELL NPALNRERLP APEPQAAPEP GPRRRGRPRK 
AEPGFGEAPQ AAFAHGAVTD VDPALAKSLG LRTPDDGPDL AEEPGASLAA AGVSATVDAL
TKLLTEGNPL FKDGKPWVPH RPERPQKSEG GVAFRLKSDF SPAGDQPKAI ADLVEGVRRS
ERDQVLLGVT GSGKTFTMAK VIEETQRPAL ILAPNKTLAA QLYGEFKAFF PDNAVEYFVS
YYDYYQPEAY VPRSDTFIEK ESSINEQIDR MRHSATRALL ERDDVIIVAS VSCIYGIGSV
ETYTAMSFTV TLGERIEQRQ LIADLVALQY KRIQSDFARG TFRVRGDVIE LWPAHLEDRG
WRIGLFGDEV EAITEFDPLT GKTINPLKFV KIYANSHYVT PRPTLQQAVK GIKDELKRRV
EELTRMGRLI EAQRLEQRCT FDLEMIEATG ACNGIENYSR YLTGRKPGEP PPTLFEYLPD
NALVFTDESH VTISQIGGMY RGDFRRKATL AEYGFRLPSC LDNRPLRFEE WDAMRPQSIH
VSATPAKWEM EQTGGVFVEQ VIRPTGLVDP EVIIRPARSQ VDDLLGEVKE VAAAGYRTLV
TTLTKRMAED LTEYLHENGV RVRYMHSDID TLERIEIIRD LRLGAFDVLI GINLLREGLD
IPECALVAIL DADKEGFLRS ETSLIQTIGR AARNAEGRVI LYADQRTGSM DRAIAETERR
RAKQLAYNAE HGITPQSVKR NIADILESVF ERDHVQVDTG LAKGGVTVGH NLKAVMADLE
KRMRAAAADL DFEEAARLRD ELKRLQATEL AIAEDPLARQ GAVEDQAGRY GEKGGRRRYG
RNADLPPGTG GAEEPLGSGP LGKGVSDEGT RIRRPTLDEM GPGTDREIPI FTERPAARST
QGFPGQRPKY KGRKGRG