Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4496 |
Symbol | |
ID | 6133450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 4949284 |
End bp | 4952511 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641644636 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_001771271 |
Protein GI | 170742616 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0964877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0589388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGTCG AGCTTCAGGT CACCACGCAC TACTCCTTCC TGCGGGGCGC CTCCTCGCCG GAGGAGCTGT TCGCGACCGC CGCACTCCTC GGCCTCACCG CCCTCGGCGT CACGGACCGC CACTCGGTGG CCGGGCTCGT GAAGGCGCAC GAGGCCGCGC GGGCGACGGG CTGCCGCCTC GTGGCGGGCT GCCGCCTCGA CCTCTCGGGC CCGGATGCCG GCACCGCCCT CCTGGTCTAC CCGACCGACC GCGCCGCCTA CGGCCGGCTC TGCCGCCTGC TCACGCTCGG CAAGGGCCGG GCCGGCAAGG GCGGCTGCAC CCTCGACCTC TCCGACCTCG CCGCGTGGCG CGAGGGCCTG ATCGCGGTCC TGCTCGCGGA CCGGCCCGAC GAGGCCCTGC CCCGGCGCCT CGGGCGCCTG CGGGAGGTCT TCGGCCGGCG CGCGCATTGC GCCCTCACCC GCCGCTTCGG GGTGAACGAC CAGCTCCGGC TCGACCGCGT CGCCGACCTC GCCCGCGCCG CGCGGATCCC CACCGTCGCG ACCGGGGACG TGCTCTGCCA CGTCCCCGAG CGGCGCCTGC TGCAGGACGT CGTCACCTGC ATCCGCCTCG GCACCACGAT CGACGCGGCG GGCTTCGCGC GGGAGCGCCA TGCCGGGCGC CACCTGCAGG CGCCGGCCGA GACCGCGCGC CTCTTCGCCC GCCATCCGGA GGCCGTGGAG CGGGCGCGGG CCATCGCCGA GGCGTGCCGC TTCTCCCTCG ACGACCTCAC CTACACCTAT CCGGACGAGG TCGGGGAGGA CGGCCGCTCG GCCCTGGAGC GGCTGGAGAC CATGACCCTG GAGGGCGCGG CCCGGCGCTA TCCGGACGGC GTGCCGGAGG AGGTGCACCG GCAGATCCGG CACGAATTCG AGCTCATCGC CCGCAAGGGC TACGCCCCCT ACTTCCTCAC CGTCGAGGCG ATCGTGCGCT TCGCCCAGCG CCAGGGCATC CTCTGCCAGG GGCGCGGCTC GGCGGCGAAC TCGGTCGTCT GCTACTGCCT CGGCATCACC GCGATCGATC CGGTGCGCCA GAAGCTGCTG TTCGAGCGCT TCGTCTCCGA CAACCGGGAC GAGCCGCCCG ACATCGACGT CGATTTCGAG CACGAGCGGC GCGAGGAGGT GATCCAGTGG GTCTACGCGA CCTACGGGCG CCACCGCGCG GCGCTCACCG CCACGGTGAT CCGCTACGGC GCCCGCGGGG CCGTGCGCGA GGTCGGCAAG GTGCTGGGCG TGCCCGAGGA CGTGACCGGG GCGCTGGCCC GCCTGGTCTG GGGCTGGTCG CGGGAGGGGG TCGGCGAGCG GGAGGCGCGG GCCCTCAACC TCAACCTCGC GGATCGCCGC CTGCGCCTGA CCCTCGACCT CGCCCGGGCG CTGATCGGCA CGCCGCGCCA TCTCGGCCAG CATCCGGGCG GCTTCGTGCT CACCCTCGAC CGCCTCGACG AGCTCTGCCC GATCACCCCC GCGACGATGG AGAACCGCCA GACCATCGAG TGGGACAAGG ACGACATCGA GGCCCTCCGG TTCATGAAGG TCGACGTGCT CGGGCTCGGC ATGCTGGGCT GCCTGCGCCG GGCCTTCGAG CTCCTGGGCG AGCACCGGGG CGAGACCGAC CCGCCGCGGG AGATCGCCGC GATCCCGCCG GAGGACGAGG CCACCTACGC GATGATCCGG CGCGCCGACA CGCTCGGCGT GTTCCAGATC GAGAGCCGGG CCCAGATGGC GATGCTGCCC CGGATGCAGC CCAGGAACCT CTACGACCTC ACCATCGAGG TCGCGGTGGT GCGCCCCGGC CCGATCCAGG GCGACATGGT CCATCCCTAC CTGCGCCGCC GCCGCGGGAT CGAGCGGCCC GAATACCCGA GCGAGGCGCT CAGGAGCGTG CTGGAGCGGA CGCTCGGCGT GCCGCTCTTC CAGGAGCAGG CCATGCAGGT CGCGATCGTG GCGGCCGGCT TCACCCCCGC GGAGGCGGAC GGGCTGCGCC GCGCCATGGC GACCTTCAAG GCCAACGGCA AGATCGGCCT CTACCGCGAG AAGCTGATCG CCGGGATGAT CCGCAACGGC TACGCGGCGG ACTTCGCCGA GCGCACCTTC CGGCAGCTCG AGGGCTTCGG CTCCTACGGC TTCCCGGAGA GCCACGCGGC CTCCTTCGCG CTCATCGCCT ACGCCTCGTC CTGGCTGAAG TGCCACCATC CGGACGTGTT CTGCTGCGCC CTCCTCAACG CGCAGCCGAT GGGCTTCTAC GCCCCCGCCC AGATCGTGCG GGACGCCCGC CGGCACGGCG TGCCGGTGCG CCCGATCGAC GTGAACGCCT CGCGCTGGGA TTGCACCCTG GAGAAGGCCG AGGGACCGCG CCTCGCCGTG CGGCTCGGCC TGCGCCTGGT GCGGGGCCTC GCCAACGCGG AGGGCGCCCG GATCGCCACC GTGCGCGAGG CGGATCTCTT CCGCTCGCCG GAGGATCTCT GGCGCCGCAC CGCCGTCCCG CTCAGGGCCC TGGAGAGCCT CGCGGCGGCG GACGCGTTCG GGTCGCTGGG CCTCGGGCGC CGGGAGGCGC TCTGGGCGAT CCGGGGCCTC GCCCCGGTGC CGCTCCCCCT CTTCGCGGCG GCGGATGCCC GCGAGGCGGC GATCCGGCCG GAACTCGACG AGCCCGCGGT GGCGCTGGCG CCGATGCCGG AGGGCGCCGG CGTGGTGGCG GATTACCGGG CCGCGAGCCT CAGCCTCGGC CGCCACCCGG TCGCCTTCCT GCGCCCCGAC CTCGCCCGGG ACGGGATGAG CGCCTGCGCG GCGCTGCGGC GCCTGCGGGA CGGGGCGCGG GTGACGGTGG CGGGGCTGGT GCTGGTGCGC CAGAAGCCGG GCTCGGCCAA GGGCGTGATG TTCATCACCC TCGAGGACGA GACCGACGTG GCCAACCTCG TGGTCTGGCC CTCGCTCTTC GCCCGCCAGC GCGGCCTGAT CCTCTCGGCC GGCATGATGG CGGCCCGCGG CCGGGTGCAG CGGGAGGGCG AGGTGATCCA CCTCGTCGCC GAGCACCTGA TCGACCTCTC GGACCTGCTG GCGCAGGTGG GCGGGCGCGG CGCCCCGCTG CCGCCGCCGG GCGGGCGCGG GGACGAGGCG CGCCACGGCG GCGGCGACGC GCGGGGCCTC GCCCGCCCGG CCGGCGCCCT GCGGATCAGG ACGCGGGACT TCCGGTGA
|
Protein sequence | MTVELQVTTH YSFLRGASSP EELFATAALL GLTALGVTDR HSVAGLVKAH EAARATGCRL VAGCRLDLSG PDAGTALLVY PTDRAAYGRL CRLLTLGKGR AGKGGCTLDL SDLAAWREGL IAVLLADRPD EALPRRLGRL REVFGRRAHC ALTRRFGVND QLRLDRVADL ARAARIPTVA TGDVLCHVPE RRLLQDVVTC IRLGTTIDAA GFARERHAGR HLQAPAETAR LFARHPEAVE RARAIAEACR FSLDDLTYTY PDEVGEDGRS ALERLETMTL EGAARRYPDG VPEEVHRQIR HEFELIARKG YAPYFLTVEA IVRFAQRQGI LCQGRGSAAN SVVCYCLGIT AIDPVRQKLL FERFVSDNRD EPPDIDVDFE HERREEVIQW VYATYGRHRA ALTATVIRYG ARGAVREVGK VLGVPEDVTG ALARLVWGWS REGVGEREAR ALNLNLADRR LRLTLDLARA LIGTPRHLGQ HPGGFVLTLD RLDELCPITP ATMENRQTIE WDKDDIEALR FMKVDVLGLG MLGCLRRAFE LLGEHRGETD PPREIAAIPP EDEATYAMIR RADTLGVFQI ESRAQMAMLP RMQPRNLYDL TIEVAVVRPG PIQGDMVHPY LRRRRGIERP EYPSEALRSV LERTLGVPLF QEQAMQVAIV AAGFTPAEAD GLRRAMATFK ANGKIGLYRE KLIAGMIRNG YAADFAERTF RQLEGFGSYG FPESHAASFA LIAYASSWLK CHHPDVFCCA LLNAQPMGFY APAQIVRDAR RHGVPVRPID VNASRWDCTL EKAEGPRLAV RLGLRLVRGL ANAEGARIAT VREADLFRSP EDLWRRTAVP LRALESLAAA DAFGSLGLGR REALWAIRGL APVPLPLFAA ADAREAAIRP ELDEPAVALA PMPEGAGVVA DYRAASLSLG RHPVAFLRPD LARDGMSACA ALRRLRDGAR VTVAGLVLVR QKPGSAKGVM FITLEDETDV ANLVVWPSLF ARQRGLILSA GMMAARGRVQ REGEVIHLVA EHLIDLSDLL AQVGGRGAPL PPPGGRGDEA RHGGGDARGL ARPAGALRIR TRDFR
|
| |