Gene M446_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4496 
Symbol 
ID6133450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4949284 
End bp4952511 
Gene Length3228 bp 
Protein Length1075 aa 
Translation table11 
GC content75% 
IMG OID641644636 
ProductDNA polymerase III, alpha subunit 
Protein accessionYP_001771271 
Protein GI170742616 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0964877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0589388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCG AGCTTCAGGT CACCACGCAC TACTCCTTCC TGCGGGGCGC CTCCTCGCCG 
GAGGAGCTGT TCGCGACCGC CGCACTCCTC GGCCTCACCG CCCTCGGCGT CACGGACCGC
CACTCGGTGG CCGGGCTCGT GAAGGCGCAC GAGGCCGCGC GGGCGACGGG CTGCCGCCTC
GTGGCGGGCT GCCGCCTCGA CCTCTCGGGC CCGGATGCCG GCACCGCCCT CCTGGTCTAC
CCGACCGACC GCGCCGCCTA CGGCCGGCTC TGCCGCCTGC TCACGCTCGG CAAGGGCCGG
GCCGGCAAGG GCGGCTGCAC CCTCGACCTC TCCGACCTCG CCGCGTGGCG CGAGGGCCTG
ATCGCGGTCC TGCTCGCGGA CCGGCCCGAC GAGGCCCTGC CCCGGCGCCT CGGGCGCCTG
CGGGAGGTCT TCGGCCGGCG CGCGCATTGC GCCCTCACCC GCCGCTTCGG GGTGAACGAC
CAGCTCCGGC TCGACCGCGT CGCCGACCTC GCCCGCGCCG CGCGGATCCC CACCGTCGCG
ACCGGGGACG TGCTCTGCCA CGTCCCCGAG CGGCGCCTGC TGCAGGACGT CGTCACCTGC
ATCCGCCTCG GCACCACGAT CGACGCGGCG GGCTTCGCGC GGGAGCGCCA TGCCGGGCGC
CACCTGCAGG CGCCGGCCGA GACCGCGCGC CTCTTCGCCC GCCATCCGGA GGCCGTGGAG
CGGGCGCGGG CCATCGCCGA GGCGTGCCGC TTCTCCCTCG ACGACCTCAC CTACACCTAT
CCGGACGAGG TCGGGGAGGA CGGCCGCTCG GCCCTGGAGC GGCTGGAGAC CATGACCCTG
GAGGGCGCGG CCCGGCGCTA TCCGGACGGC GTGCCGGAGG AGGTGCACCG GCAGATCCGG
CACGAATTCG AGCTCATCGC CCGCAAGGGC TACGCCCCCT ACTTCCTCAC CGTCGAGGCG
ATCGTGCGCT TCGCCCAGCG CCAGGGCATC CTCTGCCAGG GGCGCGGCTC GGCGGCGAAC
TCGGTCGTCT GCTACTGCCT CGGCATCACC GCGATCGATC CGGTGCGCCA GAAGCTGCTG
TTCGAGCGCT TCGTCTCCGA CAACCGGGAC GAGCCGCCCG ACATCGACGT CGATTTCGAG
CACGAGCGGC GCGAGGAGGT GATCCAGTGG GTCTACGCGA CCTACGGGCG CCACCGCGCG
GCGCTCACCG CCACGGTGAT CCGCTACGGC GCCCGCGGGG CCGTGCGCGA GGTCGGCAAG
GTGCTGGGCG TGCCCGAGGA CGTGACCGGG GCGCTGGCCC GCCTGGTCTG GGGCTGGTCG
CGGGAGGGGG TCGGCGAGCG GGAGGCGCGG GCCCTCAACC TCAACCTCGC GGATCGCCGC
CTGCGCCTGA CCCTCGACCT CGCCCGGGCG CTGATCGGCA CGCCGCGCCA TCTCGGCCAG
CATCCGGGCG GCTTCGTGCT CACCCTCGAC CGCCTCGACG AGCTCTGCCC GATCACCCCC
GCGACGATGG AGAACCGCCA GACCATCGAG TGGGACAAGG ACGACATCGA GGCCCTCCGG
TTCATGAAGG TCGACGTGCT CGGGCTCGGC ATGCTGGGCT GCCTGCGCCG GGCCTTCGAG
CTCCTGGGCG AGCACCGGGG CGAGACCGAC CCGCCGCGGG AGATCGCCGC GATCCCGCCG
GAGGACGAGG CCACCTACGC GATGATCCGG CGCGCCGACA CGCTCGGCGT GTTCCAGATC
GAGAGCCGGG CCCAGATGGC GATGCTGCCC CGGATGCAGC CCAGGAACCT CTACGACCTC
ACCATCGAGG TCGCGGTGGT GCGCCCCGGC CCGATCCAGG GCGACATGGT CCATCCCTAC
CTGCGCCGCC GCCGCGGGAT CGAGCGGCCC GAATACCCGA GCGAGGCGCT CAGGAGCGTG
CTGGAGCGGA CGCTCGGCGT GCCGCTCTTC CAGGAGCAGG CCATGCAGGT CGCGATCGTG
GCGGCCGGCT TCACCCCCGC GGAGGCGGAC GGGCTGCGCC GCGCCATGGC GACCTTCAAG
GCCAACGGCA AGATCGGCCT CTACCGCGAG AAGCTGATCG CCGGGATGAT CCGCAACGGC
TACGCGGCGG ACTTCGCCGA GCGCACCTTC CGGCAGCTCG AGGGCTTCGG CTCCTACGGC
TTCCCGGAGA GCCACGCGGC CTCCTTCGCG CTCATCGCCT ACGCCTCGTC CTGGCTGAAG
TGCCACCATC CGGACGTGTT CTGCTGCGCC CTCCTCAACG CGCAGCCGAT GGGCTTCTAC
GCCCCCGCCC AGATCGTGCG GGACGCCCGC CGGCACGGCG TGCCGGTGCG CCCGATCGAC
GTGAACGCCT CGCGCTGGGA TTGCACCCTG GAGAAGGCCG AGGGACCGCG CCTCGCCGTG
CGGCTCGGCC TGCGCCTGGT GCGGGGCCTC GCCAACGCGG AGGGCGCCCG GATCGCCACC
GTGCGCGAGG CGGATCTCTT CCGCTCGCCG GAGGATCTCT GGCGCCGCAC CGCCGTCCCG
CTCAGGGCCC TGGAGAGCCT CGCGGCGGCG GACGCGTTCG GGTCGCTGGG CCTCGGGCGC
CGGGAGGCGC TCTGGGCGAT CCGGGGCCTC GCCCCGGTGC CGCTCCCCCT CTTCGCGGCG
GCGGATGCCC GCGAGGCGGC GATCCGGCCG GAACTCGACG AGCCCGCGGT GGCGCTGGCG
CCGATGCCGG AGGGCGCCGG CGTGGTGGCG GATTACCGGG CCGCGAGCCT CAGCCTCGGC
CGCCACCCGG TCGCCTTCCT GCGCCCCGAC CTCGCCCGGG ACGGGATGAG CGCCTGCGCG
GCGCTGCGGC GCCTGCGGGA CGGGGCGCGG GTGACGGTGG CGGGGCTGGT GCTGGTGCGC
CAGAAGCCGG GCTCGGCCAA GGGCGTGATG TTCATCACCC TCGAGGACGA GACCGACGTG
GCCAACCTCG TGGTCTGGCC CTCGCTCTTC GCCCGCCAGC GCGGCCTGAT CCTCTCGGCC
GGCATGATGG CGGCCCGCGG CCGGGTGCAG CGGGAGGGCG AGGTGATCCA CCTCGTCGCC
GAGCACCTGA TCGACCTCTC GGACCTGCTG GCGCAGGTGG GCGGGCGCGG CGCCCCGCTG
CCGCCGCCGG GCGGGCGCGG GGACGAGGCG CGCCACGGCG GCGGCGACGC GCGGGGCCTC
GCCCGCCCGG CCGGCGCCCT GCGGATCAGG ACGCGGGACT TCCGGTGA
 
Protein sequence
MTVELQVTTH YSFLRGASSP EELFATAALL GLTALGVTDR HSVAGLVKAH EAARATGCRL 
VAGCRLDLSG PDAGTALLVY PTDRAAYGRL CRLLTLGKGR AGKGGCTLDL SDLAAWREGL
IAVLLADRPD EALPRRLGRL REVFGRRAHC ALTRRFGVND QLRLDRVADL ARAARIPTVA
TGDVLCHVPE RRLLQDVVTC IRLGTTIDAA GFARERHAGR HLQAPAETAR LFARHPEAVE
RARAIAEACR FSLDDLTYTY PDEVGEDGRS ALERLETMTL EGAARRYPDG VPEEVHRQIR
HEFELIARKG YAPYFLTVEA IVRFAQRQGI LCQGRGSAAN SVVCYCLGIT AIDPVRQKLL
FERFVSDNRD EPPDIDVDFE HERREEVIQW VYATYGRHRA ALTATVIRYG ARGAVREVGK
VLGVPEDVTG ALARLVWGWS REGVGEREAR ALNLNLADRR LRLTLDLARA LIGTPRHLGQ
HPGGFVLTLD RLDELCPITP ATMENRQTIE WDKDDIEALR FMKVDVLGLG MLGCLRRAFE
LLGEHRGETD PPREIAAIPP EDEATYAMIR RADTLGVFQI ESRAQMAMLP RMQPRNLYDL
TIEVAVVRPG PIQGDMVHPY LRRRRGIERP EYPSEALRSV LERTLGVPLF QEQAMQVAIV
AAGFTPAEAD GLRRAMATFK ANGKIGLYRE KLIAGMIRNG YAADFAERTF RQLEGFGSYG
FPESHAASFA LIAYASSWLK CHHPDVFCCA LLNAQPMGFY APAQIVRDAR RHGVPVRPID
VNASRWDCTL EKAEGPRLAV RLGLRLVRGL ANAEGARIAT VREADLFRSP EDLWRRTAVP
LRALESLAAA DAFGSLGLGR REALWAIRGL APVPLPLFAA ADAREAAIRP ELDEPAVALA
PMPEGAGVVA DYRAASLSLG RHPVAFLRPD LARDGMSACA ALRRLRDGAR VTVAGLVLVR
QKPGSAKGVM FITLEDETDV ANLVVWPSLF ARQRGLILSA GMMAARGRVQ REGEVIHLVA
EHLIDLSDLL AQVGGRGAPL PPPGGRGDEA RHGGGDARGL ARPAGALRIR TRDFR